| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1035 |
|---|
| Symbol | |
|---|
| ID | 2741513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 1063594 |
|---|
| End bp | 1063920 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637159908 |
|---|
| Product | PadR family transcriptional regulator |
|---|
| Protein accession | NP_971643 |
|---|
| Protein GI | 42526545 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00460025 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAACA AGCAGGAGAT ATTACGCGGA CTTACCGATA CGCTTATTTT AGGCCGGCTG
TATTCTAAGG ACAGTTACGG TTATGAAATA AATAAACAAA TTCATCAAAA GAGTTCATCC
TTATTTCAAC TTACCGAAGC AACATTGTAC ACTGCCTTTA GACGGTTGGA AGCGGCAGGA
CTTTTAACTT CCTATTGGGG TGATGGCGAT ACGGGTGCCC GAAGGCGGTA TTATTCAATC
ACAAAAACGG GGAAAAAGTT GTACCGTGAA AATGTAAACG ATTGGGAAGA ATTTTCCGCT
GCTATTTCCG GTTTGCTTGA ATTATAG
|
|---|
| Protein sequence | MLNKQEILRG LTDTLILGRL YSKDSYGYEI NKQIHQKSSS LFQLTEATLY TAFRRLEAAG
LLTSYWGDGD TGARRRYYSI TKTGKKLYRE NVNDWEEFSA AISGLLEL
|
|---|
| |