| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1033 |
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| Symbol | |
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| ID | 2741511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1061209 |
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| End bp | 1062555 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637159906 |
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| Product | polyA polymerase family protein |
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| Protein accession | NP_971641 |
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| Protein GI | 42526543 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0733439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTATC CTGTTTCAAA AAAAATGAGT GAGATTGCTT CCGTTTTTTT CAATGCCGGT
TTTTCGGCCT ACCTTGTGGG CGGAGCTGTG CGGGACTGGT TTTTAGGAAA GCCGTGCAAG
GATTACGATA TAGCTACCGA TGCCGAACCC AAGGAAGTTC AAGCCCTTTT CCGTAAGACG
ATTCCCACGG GGATAGCCCA CGGTACGGTT ACTATTCTTT ACAAGGACGA AAAAATAGAA
TGTACCACCT TCCGCTGCGA GGCCGATTAT TCCGACGGCC GGAGGCCTCA GAGCGTTAAC
TATGTCCGTT CAATAGAAGA AGATTTGAGC CGCAGAGACT TCACTATGAA TGCAATAGCC
GTTTCTTTGA AGGACGGCTC CATTGTTGAC CCTTTTGATG GTGTAAAATC AATAAAATCA
AAAACCATTA AAACCGTCGG CTCTCCCCTT GACCGCTTTG GGGAAGACGG CTTGAGGCCT
ATCAGGGCAA TCCGCTTTGC TTCACAGCTG GGCTTTAAGA TAGAAGAGGA AACATTAAAA
GCGATTCCTT TAAGTATTGA AGTTTGCAAA AAAGTTTCGA TAGAAAGGTT TCGGGACGAA
TTCGTTAAAA TGCTTTTAAG TGAGCATCCT ATAATTTCTT TAAAGCTCTT GGAGGATACG
GGGCTTTTAA AAGTCTTTTT GCCCGAGCTT TCGGATTGCC GCGGGGTTGA GCAAAAAGGA
ATGCACTCCT TCGATGTGCT TGACCACAGC TTTTTAAGCT GCGATGCCGC TCCGCAAGAT
AATCCGATTG TGCGTTTAGC CGCCCTTTTC CACGATATAG GAAAGGTAAG CACCAGAGAA
AAAAATGAAT ACGGCGATTA TACCTTTTAT AAGCATGAGG CGGTTTCGGA AAAACTTACC
AAAAAGATAA TGCAGCGTTT AAAATTCCCG AATAAGGAAA TTGAAGAGGT CTCTCATCTG
GTGGGGCTTC ACATGTTTCA TTATACGGAG GATTGGACCG ATGCTGCAGT CCGCCGCTTT
ATAGTCAGAG CCGGAGTAGA AAATATTCCG AATCTCTTCG ATTTAAGAAG GGCCGACGGT
TTCGGCATGA CGGGACAGGC TCCCGATTTA AGCAATTTGG CGGCCTTTAA AAAAAGGCTT
GAAAAAGTCA TAGCCGAAGA TTCTGCCCTG AGTTTAAAAG ATCTGGCCGT CGGCGGCAGA
GAGCTGATGG AAATCGGAAT TCCTGCAGGC CCTAAGCTCG GCATAATCTT ACAAAAGCTA
TTTGAAGCCG TTCTTGAAGA CCCTTCACAA AATACCAAAG CCCAACTTTT AAAAATTGCG
GCTGCAATAA ATTCCAATTT AAGTTAA
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| Protein sequence | MRYPVSKKMS EIASVFFNAG FSAYLVGGAV RDWFLGKPCK DYDIATDAEP KEVQALFRKT
IPTGIAHGTV TILYKDEKIE CTTFRCEADY SDGRRPQSVN YVRSIEEDLS RRDFTMNAIA
VSLKDGSIVD PFDGVKSIKS KTIKTVGSPL DRFGEDGLRP IRAIRFASQL GFKIEEETLK
AIPLSIEVCK KVSIERFRDE FVKMLLSEHP IISLKLLEDT GLLKVFLPEL SDCRGVEQKG
MHSFDVLDHS FLSCDAAPQD NPIVRLAALF HDIGKVSTRE KNEYGDYTFY KHEAVSEKLT
KKIMQRLKFP NKEIEEVSHL VGLHMFHYTE DWTDAAVRRF IVRAGVENIP NLFDLRRADG
FGMTGQAPDL SNLAAFKKRL EKVIAEDSAL SLKDLAVGGR ELMEIGIPAG PKLGIILQKL
FEAVLEDPSQ NTKAQLLKIA AAINSNLS
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