| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1012 |
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| Symbol | |
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| ID | 2740992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1041533 |
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| End bp | 1043986 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637159886 |
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| Product | tex protein, putative |
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| Protein accession | NP_971621 |
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| Protein GI | 42526523 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTA CAAATGAATT TATTGAAGGC CTCAGTGTAA ACGAGGCCGA TATTATGAAG
AAGATTGCAG AAGAACTTAA CATAAAAGTT GCTCAAGTCT CTGCAGTTAT AAGTTTGGTC
AATGAGGGAT GCACCATCCC CTTTATTTCC CGTTATCGAA AAGAAATGCA CGGTTCTCTT
GATGAAGTTC AAGTCAGGGA TTCAGACCGC CTGTTTAAAT CTTATACAAA TTTGGAAACC
CGCCGCCTCG AAATTGTGCG GGGGATTTTT GCTGCCGGAA AGTTGACCGA TTCTCTTTAT
GAAAATATAA TGAAGGCCGG AACTCTTACC GAGCTTGAAG ACATTTGGCT TCCCTTTAAA
AAGAAAAAGA AAACCCGCGG TATGCTTGCC GTTGAAAGAG GCTTGCAGGC TTTAGCCGAT
TTGATGAAAG AGCTTGAAGC CGCTCCCCTT GAAGAAAAGG CTAAAGAATT TATTGTAACC
GATGCCGAAA CGGAAGAGCT AAATGTTCCC ACGGTCGAAG ATGCCCTCCA AGGTGCTGCC
GATATAATTG CCGAAGAAAT TTCTCAAGAT ACCGAAAACC GCAAAGCCGT TCATGATTAT
TTTATAAAGA CCGGAAAGTT TGAAGTTAAG GGACTCGGTG ATGAAGAGGC TGCAAAGACT
TCCGTTTATC AGATGTACTG GGATTATTCC GAAAACTTAA ACGAAATAAA ACCCCACCGC
GTGCTTGCGA TTAACCGCGG AGAAAGGGAA GGGGTTTTGG AAGTAAAAAT AGATGTAAGC
ATCGAAGATG CAATTTCTCT TTTGCAAAAT AAGTATACAC TAAATAACGA CTACCATAAG
GAAGCTATAG CCGACGGACT TGTTCGTTTG CTTGCTCCTG CAGTTTTAAG AGAAATAAGA
AGCGACCTCG CCGACACCGC TGATGAGCAC GGTATAAATA TTTTCAGTGA AAACTTAAAG
CATCTTTTGA TGACCCAACC CATCAAGGGC ACAAGGGTTT TAGGAGTTGA CCCCGGTATA
AGGACGGGAA CTAAATGTGC CGCTCTCGAT GAAACAGGAA AATACCTAGG CTCCTTTGTG
ATTTATCAGC ATAAGACTGA AGAAGCAAAA TTCTTGGTAT TGGAAGCCGT TAAAAAATAC
AATGTTCAGC TAATTGCTGT CGGCAACGGC ACAGGCTCCC ACGAGGTGCA GGAAATAGTT
TCCGCCGTTA TCAAAGAATC TTGTCCCGAT GTATTGTTTA CGGTAGTCGA TGAAGACGGA
GCTTCGGTTT ATTCTGCAGG CGATGTCGCC CGCGAAGAAT TCCCCGATTT GGATTTAACG
ATAAGAGGGG CTATTTCAAT CGGAAGAAGA TTGCAGGACC CTCTTGCAGA GCTTGTAAAG
ATTGATCCCA AGTCCATAGG TGTCGGTTTA TATCAGCACG ACTTAAACCA AAAAAAATTA
AGCGAAGAGC TTGATGCTGT TGTAGGTTCC GTAGTAAATA ATGTAGGCGT AAATTTAAAC
ACTGCAAGTG CTTCTTTGTT AAAATACGTT TCGGGTGTAA GTTCATCTCT TGCAAAAAAA
ATTGTAGCCT GCCGTGAAGC CGAAGGGATT TTTACCGACA GGGAACAATT AAAAAAGGTA
AGCGGAATGG GGCCTAAATC ATTTGAGCAG TGTGCCGGCT TTTTAAAAAT CCCCGAAAGC
TCGAATCCCT TGGACAATTC TTGGGTTCAT CCCGAAAACT ATGAAACCGG AAAAATCATC
TACGATGTAA TTCATAAAAA TGAAGAAGTT TCGGGTGAGC TTCGAAGCGA AATAAAAACC
AAGTACAATA TCGGAGACCA GACCATAAAC GATATTATCG AAGAATTAAA AAAGCCTAAC
CGTGATCCGC GCGAAGATTG TCCTAAGCCC ATCATGCAGC AAGGCGTTCT TCAATTTGAA
GACCTAAAAG TCGGAATGAC CGTAAAGGGA AAAATCAAAA ACGTAGTAGA CTTCGGAGCC
TTTGTCGATT TGGGAATTAA GGAAACGGCT CTTTTACATA TCTCGGAGAT GAGCGATTCT
TTTATCTCGG ATCCGCTTGA GGCCGTAAAG GTAGGCGACA TTGTAGAGTG TAAAATTATT
TCACTTGACG AAGACCGCCG CCGAATTTCT TTAAGCCGAA AAACGGGAGA AGGCGGTGCC
GATGGCAAAG CCCGGGGTGC ATCCCGTCTT ACCGCAAAGC AAAAGGCTGA GGTAAAAAAA
CTTGTAGTCA AAACCAAGGA CGGCAAAACG CTTACGGTTA AAACCGCTGC AGGATCTCCG
ACGGTACAGG GAGGCAAGGA GCTTTCCGAA AGAGGAGAAA GAAGCCCCGC TGCAAGAGGA
GAAAGATCTC CTGCACATCG AGGCGATAGA AAGGTGGGTG AACCCCGCTC CCGCAAAGAT
GATGACGGTA CAAAGTACAA TCCCTTTGCA ATATTATTGC AGGGCAAAAA ATAA
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| Protein sequence | MEFTNEFIEG LSVNEADIMK KIAEELNIKV AQVSAVISLV NEGCTIPFIS RYRKEMHGSL
DEVQVRDSDR LFKSYTNLET RRLEIVRGIF AAGKLTDSLY ENIMKAGTLT ELEDIWLPFK
KKKKTRGMLA VERGLQALAD LMKELEAAPL EEKAKEFIVT DAETEELNVP TVEDALQGAA
DIIAEEISQD TENRKAVHDY FIKTGKFEVK GLGDEEAAKT SVYQMYWDYS ENLNEIKPHR
VLAINRGERE GVLEVKIDVS IEDAISLLQN KYTLNNDYHK EAIADGLVRL LAPAVLREIR
SDLADTADEH GINIFSENLK HLLMTQPIKG TRVLGVDPGI RTGTKCAALD ETGKYLGSFV
IYQHKTEEAK FLVLEAVKKY NVQLIAVGNG TGSHEVQEIV SAVIKESCPD VLFTVVDEDG
ASVYSAGDVA REEFPDLDLT IRGAISIGRR LQDPLAELVK IDPKSIGVGL YQHDLNQKKL
SEELDAVVGS VVNNVGVNLN TASASLLKYV SGVSSSLAKK IVACREAEGI FTDREQLKKV
SGMGPKSFEQ CAGFLKIPES SNPLDNSWVH PENYETGKII YDVIHKNEEV SGELRSEIKT
KYNIGDQTIN DIIEELKKPN RDPREDCPKP IMQQGVLQFE DLKVGMTVKG KIKNVVDFGA
FVDLGIKETA LLHISEMSDS FISDPLEAVK VGDIVECKII SLDEDRRRIS LSRKTGEGGA
DGKARGASRL TAKQKAEVKK LVVKTKDGKT LTVKTAAGSP TVQGGKELSE RGERSPAARG
ERSPAHRGDR KVGEPRSRKD DDGTKYNPFA ILLQGKK
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