Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1012 |
Symbol | |
ID | 2740992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1041533 |
End bp | 1043986 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637159886 |
Product | tex protein, putative |
Protein accession | NP_971621 |
Protein GI | 42526523 |
COG category | [K] Transcription |
COG ID | [COG2183] Transcriptional accessory protein |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTA CAAATGAATT TATTGAAGGC CTCAGTGTAA ACGAGGCCGA TATTATGAAG AAGATTGCAG AAGAACTTAA CATAAAAGTT GCTCAAGTCT CTGCAGTTAT AAGTTTGGTC AATGAGGGAT GCACCATCCC CTTTATTTCC CGTTATCGAA AAGAAATGCA CGGTTCTCTT GATGAAGTTC AAGTCAGGGA TTCAGACCGC CTGTTTAAAT CTTATACAAA TTTGGAAACC CGCCGCCTCG AAATTGTGCG GGGGATTTTT GCTGCCGGAA AGTTGACCGA TTCTCTTTAT GAAAATATAA TGAAGGCCGG AACTCTTACC GAGCTTGAAG ACATTTGGCT TCCCTTTAAA AAGAAAAAGA AAACCCGCGG TATGCTTGCC GTTGAAAGAG GCTTGCAGGC TTTAGCCGAT TTGATGAAAG AGCTTGAAGC CGCTCCCCTT GAAGAAAAGG CTAAAGAATT TATTGTAACC GATGCCGAAA CGGAAGAGCT AAATGTTCCC ACGGTCGAAG ATGCCCTCCA AGGTGCTGCC GATATAATTG CCGAAGAAAT TTCTCAAGAT ACCGAAAACC GCAAAGCCGT TCATGATTAT TTTATAAAGA CCGGAAAGTT TGAAGTTAAG GGACTCGGTG ATGAAGAGGC TGCAAAGACT TCCGTTTATC AGATGTACTG GGATTATTCC GAAAACTTAA ACGAAATAAA ACCCCACCGC GTGCTTGCGA TTAACCGCGG AGAAAGGGAA GGGGTTTTGG AAGTAAAAAT AGATGTAAGC ATCGAAGATG CAATTTCTCT TTTGCAAAAT AAGTATACAC TAAATAACGA CTACCATAAG GAAGCTATAG CCGACGGACT TGTTCGTTTG CTTGCTCCTG CAGTTTTAAG AGAAATAAGA AGCGACCTCG CCGACACCGC TGATGAGCAC GGTATAAATA TTTTCAGTGA AAACTTAAAG CATCTTTTGA TGACCCAACC CATCAAGGGC ACAAGGGTTT TAGGAGTTGA CCCCGGTATA AGGACGGGAA CTAAATGTGC CGCTCTCGAT GAAACAGGAA AATACCTAGG CTCCTTTGTG ATTTATCAGC ATAAGACTGA AGAAGCAAAA TTCTTGGTAT TGGAAGCCGT TAAAAAATAC AATGTTCAGC TAATTGCTGT CGGCAACGGC ACAGGCTCCC ACGAGGTGCA GGAAATAGTT TCCGCCGTTA TCAAAGAATC TTGTCCCGAT GTATTGTTTA CGGTAGTCGA TGAAGACGGA GCTTCGGTTT ATTCTGCAGG CGATGTCGCC CGCGAAGAAT TCCCCGATTT GGATTTAACG ATAAGAGGGG CTATTTCAAT CGGAAGAAGA TTGCAGGACC CTCTTGCAGA GCTTGTAAAG ATTGATCCCA AGTCCATAGG TGTCGGTTTA TATCAGCACG ACTTAAACCA AAAAAAATTA AGCGAAGAGC TTGATGCTGT TGTAGGTTCC GTAGTAAATA ATGTAGGCGT AAATTTAAAC ACTGCAAGTG CTTCTTTGTT AAAATACGTT TCGGGTGTAA GTTCATCTCT TGCAAAAAAA ATTGTAGCCT GCCGTGAAGC CGAAGGGATT TTTACCGACA GGGAACAATT AAAAAAGGTA AGCGGAATGG GGCCTAAATC ATTTGAGCAG TGTGCCGGCT TTTTAAAAAT CCCCGAAAGC TCGAATCCCT TGGACAATTC TTGGGTTCAT CCCGAAAACT ATGAAACCGG AAAAATCATC TACGATGTAA TTCATAAAAA TGAAGAAGTT TCGGGTGAGC TTCGAAGCGA AATAAAAACC AAGTACAATA TCGGAGACCA GACCATAAAC GATATTATCG AAGAATTAAA AAAGCCTAAC CGTGATCCGC GCGAAGATTG TCCTAAGCCC ATCATGCAGC AAGGCGTTCT TCAATTTGAA GACCTAAAAG TCGGAATGAC CGTAAAGGGA AAAATCAAAA ACGTAGTAGA CTTCGGAGCC TTTGTCGATT TGGGAATTAA GGAAACGGCT CTTTTACATA TCTCGGAGAT GAGCGATTCT TTTATCTCGG ATCCGCTTGA GGCCGTAAAG GTAGGCGACA TTGTAGAGTG TAAAATTATT TCACTTGACG AAGACCGCCG CCGAATTTCT TTAAGCCGAA AAACGGGAGA AGGCGGTGCC GATGGCAAAG CCCGGGGTGC ATCCCGTCTT ACCGCAAAGC AAAAGGCTGA GGTAAAAAAA CTTGTAGTCA AAACCAAGGA CGGCAAAACG CTTACGGTTA AAACCGCTGC AGGATCTCCG ACGGTACAGG GAGGCAAGGA GCTTTCCGAA AGAGGAGAAA GAAGCCCCGC TGCAAGAGGA GAAAGATCTC CTGCACATCG AGGCGATAGA AAGGTGGGTG AACCCCGCTC CCGCAAAGAT GATGACGGTA CAAAGTACAA TCCCTTTGCA ATATTATTGC AGGGCAAAAA ATAA
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Protein sequence | MEFTNEFIEG LSVNEADIMK KIAEELNIKV AQVSAVISLV NEGCTIPFIS RYRKEMHGSL DEVQVRDSDR LFKSYTNLET RRLEIVRGIF AAGKLTDSLY ENIMKAGTLT ELEDIWLPFK KKKKTRGMLA VERGLQALAD LMKELEAAPL EEKAKEFIVT DAETEELNVP TVEDALQGAA DIIAEEISQD TENRKAVHDY FIKTGKFEVK GLGDEEAAKT SVYQMYWDYS ENLNEIKPHR VLAINRGERE GVLEVKIDVS IEDAISLLQN KYTLNNDYHK EAIADGLVRL LAPAVLREIR SDLADTADEH GINIFSENLK HLLMTQPIKG TRVLGVDPGI RTGTKCAALD ETGKYLGSFV IYQHKTEEAK FLVLEAVKKY NVQLIAVGNG TGSHEVQEIV SAVIKESCPD VLFTVVDEDG ASVYSAGDVA REEFPDLDLT IRGAISIGRR LQDPLAELVK IDPKSIGVGL YQHDLNQKKL SEELDAVVGS VVNNVGVNLN TASASLLKYV SGVSSSLAKK IVACREAEGI FTDREQLKKV SGMGPKSFEQ CAGFLKIPES SNPLDNSWVH PENYETGKII YDVIHKNEEV SGELRSEIKT KYNIGDQTIN DIIEELKKPN RDPREDCPKP IMQQGVLQFE DLKVGMTVKG KIKNVVDFGA FVDLGIKETA LLHISEMSDS FISDPLEAVK VGDIVECKII SLDEDRRRIS LSRKTGEGGA DGKARGASRL TAKQKAEVKK LVVKTKDGKT LTVKTAAGSP TVQGGKELSE RGERSPAARG ERSPAHRGDR KVGEPRSRKD DDGTKYNPFA ILLQGKK
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