| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1010 |
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| Symbol | uvrA |
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| ID | 2740990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1035367 |
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| End bp | 1038231 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637159884 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | NP_971619 |
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| Protein GI | 42526521 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATA AAAATCAAAG CGGACACCTA AATAAACTCA TCGTAAAGGG TGCCCGTGAA
CATAATTTGA AGAACATTGA TGTGGAGCTT CCCCGTGATA AGCTCATCGT TATATCCGGT
CTTTCAGGAT CGGGAAAAAG CTCCCTCGCC TTTGACACTA TTTTTGCCGA GGGGCAGCGC
CGTTATGTAG AATCCCTTTC GGCTTATGCA CGTCAGTTTT TAGGCAGAAT GGATAAGCCC
GATGTGGATT ACATCGAGGG GCTTTCCCCC GCTATCTCTA TAGAACAAAA AACTACGCAC
CGCAACCCCC GCTCCACGGT CGGAACGGTA ACCGAAATTT ATGACTACTA CCGCCTCCTT
TTTGCCCGTA CCGGCCATGC CCATTGCCCT TCTTGCGGAA AGGAGATTAA GGAGCAGACG
GTTGACCAGA TTATAGATAC GATTATGAGC TGGCCGGAAG GAACCCGCGT TCAGATTCTC
GCTCCCATTA TAAAGGGAAA AAAGGGAGAA CACCAAAAGA TAGTGAGCGA TGCAATAGCC
GCCGGTTTTG TGCGTGCCCG CATAGACGGC CTTCTTGTAA ACCTCGAAGA CGGGGTAAAG
CTTGATAAAC AAAAAAAACA CACAATCGAA ATAATCGTAG ACCGAATTCA GCTGTCGAAG
GATGTGCGGA AACGCCTTTC GGAATCGGTG GAAACGGCCT TGGAAAGTTC CGGCGGAACC
CTGCTTGCTA CAAGACAGGA CGATAAGGAT TCTCCCGTAA CCGAGGTTTT CTTTTCGCAA
AAAAATGCCT GTTCTGATTG CGGCATTTCG ATGCCCGAAT TGCAGCCCCG CCTTTTTTCT
TTTAATAACC CGATAGGGGC CTGCCCCGAA TGTACGGGAC TCGGAATGAC TCAGCACTTT
GACCAAGACC TGATAGCCCC CGATAAAAGC CTTTCGTTTA ATGAGGGCGT TTTCGTTCCG
TATAATCCCG AATCCGATTG GAACAGGGTG CGGTTTGAAG CCCTCGCCGC CCAATTCGAT
TTTTCTCTTG ATACGCCATT GAACAAGCTC CCCAAAAAAA TACAGACCAT CATTTGGGAA
GGTTCGGGCG ATACAAAGAT TCAGTTTTCT TATACGTCCA AAAGCGGATC GGGGAAATAT
TCTTATAACC GCCCTTGGCC GGGAATAATG GCCGACATGA ACCGGAAATA TAACGAATCT
TACTCGGCTT CTATCAGAGA ATATTATGAA AAGTTTATGT CGATAAAGCC CTGCAAAACC
TGCGGAGGAA TGAGGCTTAA ACCCGAAGTG CTGGCCGTAA CGGTGGGCAA TAAAAACATT
CATGACCTTA CCTGCCTTTC CGTCGGGGAT TCTATCGAGT TTTTTGAAAA ATTGAAGCTG
ACTGAAACGG AAGAACACAT AGCCTTTCAG ATTTTAAAAG AAATTAAGGC CCGCTTGGAA
TTTATGAAAA ACGTCGGCCT TGACTATTTA ACCTTAGAAA GAAAGGCTGC AACCCTTTCA
GGCGGCGAGG CTCAACGCAT CAGGCTTGCG ACCCAGATAG GTTCAAGTTT GATAGGTGTT
CTATATATTT TGGATGAGCC TTCGATAGGG CTTCATCAAC GGGATAATCA AAGGCTGATT
GATACTCTTT TGTACTTGCG TAATTTGGGG AATACCCTCA TCGTTGTAGA ACATGACGAG
CAAACCCTCC GCACGGCCGA CTACATTGTC GACCTCGGTC CGGGTGCAGG CGTTCACGGG
GGAAACATAA CTGCCCAAGG TACGCCTGAT GAAGTTGCAA AAGTAAAAAA CAGTTTAACG
GGGCAATATC TTGCAGGTAC GCTTAAAATG GATATTCCTA AAGAAAGGCG GAAAGGTAAC
GGAAATGCTT TGGAGCTTTC AGGGGTGAGC GAGCATAATC TAAAAGATGT TTCTATAAAA
ATTCCTTTGG GAGCCTTTAC CTGTATTACC GGAGTTTCGG GCTCGGGAAA ATCAACCCTT
TTAACCGATG TTCTATATCC GGCAGTTTCA AACAAGATTA TGCGTTCCTC TATTCCTGAA
GGGGCCTATA AAAAACTGAG CGGCCTTGAG CACATAGACA AGGTTATCAA TATCGATCAA
AGCCCCATCG GGAGAACACC ACGCTCAAAC CCTGCGACCT ATGTAGGCGT TTTTACGGGG
ATAAGGGACT TGTTTGCAAG CCTTCCCGAA TCGAAGGCGA GGGGTTATAA GCCCGGCCGC
TTTTCGTTTA ATGTAAGGGG CGGAAGGTGC GAGCATTGTC AGGGCGACGG AACCCTCACA
ATCGAGATGA ACTTTTTGCC CGATGTTTAT ATAGCCTGCG ATGTTTGCCG AGGGAAACGG
TTTAACAAAG AGACCCTCGA TGTCCGCTAT AAGGGAAAAA ACATTGCCGA TGTTTTGGAT
ATGACCATCG AGGAGGCTTC GGAATTTTTT GCTCCCATTC CTCACATTGC CCGAAAACTT
CAAACCCTCT TATCGGTCGG TTTGGGTTAT ATAAAATTAG GCCAATCGGC TCTTACTCTT
TCTGGAGGAG AAGCCCAACG GGTAAAACTT GCAAACGAAC TTGCCAAACG TTCTACAGGT
AAGACCCTCT ACATTTTGGA TGAACCTACA ACGGGCTTAC ACTTTGCGGA TGTCAAGCAG
CTCATGCAGG TTATTCATCG CCTCATAGAT CAGGGGAACA CCGTTATTAT GATAGAACAC
AACCTTGATG TTATCTTACA GGCCGATAAG ATTATCGACC TCGGCCCCGA AGGCGGAACC
AACGGAGGGC AAATCATAGC GGAAGGAACA CCTGAAGAAG TAGCAAAGAT AAAAAAATCC
TATACGGGAT ATTATATAAA GGAAATGCTT GAAAGAGTCA GGTAA
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| Protein sequence | MNNKNQSGHL NKLIVKGARE HNLKNIDVEL PRDKLIVISG LSGSGKSSLA FDTIFAEGQR
RYVESLSAYA RQFLGRMDKP DVDYIEGLSP AISIEQKTTH RNPRSTVGTV TEIYDYYRLL
FARTGHAHCP SCGKEIKEQT VDQIIDTIMS WPEGTRVQIL APIIKGKKGE HQKIVSDAIA
AGFVRARIDG LLVNLEDGVK LDKQKKHTIE IIVDRIQLSK DVRKRLSESV ETALESSGGT
LLATRQDDKD SPVTEVFFSQ KNACSDCGIS MPELQPRLFS FNNPIGACPE CTGLGMTQHF
DQDLIAPDKS LSFNEGVFVP YNPESDWNRV RFEALAAQFD FSLDTPLNKL PKKIQTIIWE
GSGDTKIQFS YTSKSGSGKY SYNRPWPGIM ADMNRKYNES YSASIREYYE KFMSIKPCKT
CGGMRLKPEV LAVTVGNKNI HDLTCLSVGD SIEFFEKLKL TETEEHIAFQ ILKEIKARLE
FMKNVGLDYL TLERKAATLS GGEAQRIRLA TQIGSSLIGV LYILDEPSIG LHQRDNQRLI
DTLLYLRNLG NTLIVVEHDE QTLRTADYIV DLGPGAGVHG GNITAQGTPD EVAKVKNSLT
GQYLAGTLKM DIPKERRKGN GNALELSGVS EHNLKDVSIK IPLGAFTCIT GVSGSGKSTL
LTDVLYPAVS NKIMRSSIPE GAYKKLSGLE HIDKVINIDQ SPIGRTPRSN PATYVGVFTG
IRDLFASLPE SKARGYKPGR FSFNVRGGRC EHCQGDGTLT IEMNFLPDVY IACDVCRGKR
FNKETLDVRY KGKNIADVLD MTIEEASEFF APIPHIARKL QTLLSVGLGY IKLGQSALTL
SGGEAQRVKL ANELAKRSTG KTLYILDEPT TGLHFADVKQ LMQVIHRLID QGNTVIMIEH
NLDVILQADK IIDLGPEGGT NGGQIIAEGT PEEVAKIKKS YTGYYIKEML ERVR
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