Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0990 |
Symbol | |
ID | 2739067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1017538 |
End bp | 1017888 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637159863 |
Product | hypothetical protein |
Protein accession | NP_971599 |
Protein GI | 42526501 |
COG category | [S] Function unknown |
COG ID | [COG1598] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000238527 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCATATA AATTGGAAAT TATTCCTGAT ACGGAAGAAA ATGGTTTTGT TGCTTCTTAT CCGGAACTTC CCGGCTGCAT TACATGCGGC TCCTCTCTTG CCTCTGTTGT AGCGAATGCT GAGGATGCTA AAAAAGAATG GTTATTTGCA GCTCTTGAAG AAGGAATTCC AATAAATGAA CCAAATGATA TAGATTCTTA TTCGGGGCAA TTTAAGCTGA GATTGCCAAA AACGCTTCAT AAAACTCTTG CGGAAGATTC TAAGAAAGAA GGTGTAAGCA TGAATCAGTA TTGTGTTTAC TTGCTTTCTA AGAACTCTTC AGAACATAAT GTCCTTTTGA ATTCAAAGTA A
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Protein sequence | MPYKLEIIPD TEENGFVASY PELPGCITCG SSLASVVANA EDAKKEWLFA ALEEGIPINE PNDIDSYSGQ FKLRLPKTLH KTLAEDSKKE GVSMNQYCVY LLSKNSSEHN VLLNSK
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