Gene TDE0986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0986 
Symbol 
ID2739063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1013201 
End bp1014181 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content42% 
IMG OID637159859 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein 
Protein accessionNP_971595 
Protein GI42526497 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0186057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATG AGCTTCTTAG AGTTGAAGAC CTTTCTGCCG GATTTGTTAC TGATGCCGGA 
TATGTTGAGG TTTTGGATAG GATAAATTTT AGTATAAAAG CCGGTCAGAC GATTTCCTTG 
GTAGGAGAGT CCGGCTGCGG TAAGAGTGTT ACTGCATCTT CTATAATGAG AATTTTACCG 
CATCCTTACG GTGAAATAAG GAAAGGTAGG ATATTATTTG AAGGCCGTAA TTTGCTTGAT 
TTGCCTATCG AAGAAATGTA TCAGATTCGT GGTTCTTCAA TTGCTATGAT ATTCCAAGAA 
CCTATGACGG CTTTAAATCC CGTTCACATG GTCAAAAAGC AGGTTGGCGA AGTTTTGGAA 
CTTCATAGAC CCGATATTAC GAAAGAAGAA ATGCCGGCTC ATATTCTTAA ATACTTAAAG 
GATGTTGAAA TTCCTTCTGC CGAACAGCGT CTTAATAACT ATCCTTTTCA GTTATCCGGA 
GGAATGAGAC AGAGGGTTAT GATCGCCATG GCTCTGGCAG GTCATCCTAA ACTTCTTATC 
GCAGATGAGC CGACCACAGC TTTGGACGTA ACCGTTCAAG CTCAAATTTT GGCCCTAATA 
AAGGAATTAC AGCGAAAAAA CAATATGGGC GTTATTTATA TTACCCACGA TATGGGTGTT 
GTTGCCGAAG TAAGCGACCA TGTTGCCGTT ATGTATGCAG GTCAAATCGT TGAAACAGGA 
CCTGTAGAGA CTATATTCAA AAATCCGAGG CATCCTTATA CAAGGGGCTT AATAGCTTCC 
ATGCCTAAGT TGGATTCAAA GCCTAAGACC CGTCTTCCCT ATATTGAAGG AAGCGTTCCG 
GCTCCTCGTG CATATCCCGC TACTTGCCGT TTTGCAGAGC GCTGCAGTTA TGCTACCGAT 
TATTGCAGAG CCAATAATCC GGTTCTTGAA GAATTTGAAA CGGATCATGT AATCCGATGT 
TTTAGAGCGA GGGAAATATA A
 
Protein sequence
MSDELLRVED LSAGFVTDAG YVEVLDRINF SIKAGQTISL VGESGCGKSV TASSIMRILP 
HPYGEIRKGR ILFEGRNLLD LPIEEMYQIR GSSIAMIFQE PMTALNPVHM VKKQVGEVLE 
LHRPDITKEE MPAHILKYLK DVEIPSAEQR LNNYPFQLSG GMRQRVMIAM ALAGHPKLLI 
ADEPTTALDV TVQAQILALI KELQRKNNMG VIYITHDMGV VAEVSDHVAV MYAGQIVETG 
PVETIFKNPR HPYTRGLIAS MPKLDSKPKT RLPYIEGSVP APRAYPATCR FAERCSYATD 
YCRANNPVLE EFETDHVIRC FRAREI