Gene TDE0982 details

Gene Information

• Locus tag: TDE0982
• ID: 2740554
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1006617
• End bp: 1008392
• Gene Length: 1776 bp
• Protein Length: 591 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637159856
• Product: dihydroorotate dehydrogenase/oxidoreductase, FAD-binding
• Protein accession: NP_971592
• Protein GI: 42526494
• COG category: [C] Energy production and conversion; [F] Nucleotide transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG0167] Dihydroorotate dehydrogenase; [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
• TIGRFAM ID: [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0423353
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAGTA AGGCAGAAAT AATACAAAAA ATTAAAAATG CAGGGCTTGC CGCGAGGGAA 
GGAAGGTCTG CTCCTGTTCT TGCAACCGTG TCGGGTGTTC TTTCTACAAA GCCTAATTTG 
ATAAGGTACT GTGCCGATGA GCTTGGCTTC GGCCTTGTAA CCACAAAGAG CTTTCAGGTG 
CTGCCCAATC CGGGAAATAG AGAACCTATC CTTTGTGAAC CCGAATTGGG CTGTTTCGGT 
AATTCCGTCG GTCTTCGTAA CTGCGGAATG GAACAGGCCG TAAAAGAACT AAAAGAGCTC 
CGCTCCTCAT GGAAAACCGA TTCTATTTTA AATGTTTCCC TTTCGGCCTC AAACCCTGAA 
GATTTTATCA GCCTTTTAAA GGGCTTTGAA GAATTAGCCG ACTGCTTTGA GCTTAACTTT 
TCATGTCCCC ATGCTTCGGC CGGCTTCGGT GCTTCCATAG GCTGCGACCC TGCGATTGCC 
GCGGAATACG TAAAAATCAT AAAAAAAGCT CTCCCCGATT GTGCCGTGCC GATTTTTGTA 
AAGCTTACCC CCAATGTAGA AGATATAGGA GCCATAGCTT CCGCCGTAAT CGAAGCAGGC 
GCAGACGGCA TAACGGCTAT CAACACCGTA GGCCCCAAGG TTTACATTGA GCCCCATTCC 
GGAAAGCCCA TCTTGCAAAA TAAACTTGGC GGAAAGGGCG GCATGAGCGG TGCGTGGGTT 
TTCCCAAGGG CTTTGGAATG TATCGGGCAA ATACGGAAGG CTGTAGGAGA AGAAATTCCT 
ATAATCGGAA TGGGAGGCGT TATGACGGGT GCTCAAGCTG CCGAACTCGT TAGGGCCGGT 
GCCGATATAA TAGGTATAGG TTCTGCCTGC GGCATGCTTG AACAAGACGA TTTAAAACCT 
TTTTTTCAAA ACCTTGCCTC GGATGCTCTA AACTGTATAC GCGGTAAAGA AACCGATAAA 
ACTTCTTCCT TTTTACGTAA AAAAAGGGCC TTGGAATACG AAGCAAAGAC CATAGTAAAA 
ATCGAAAAAG AAAGTGAAGA TATCATTATA ATTACCCTAA ACGGGAAATG TAAATTCGAA 
GCAGGGCAGT TTGTGTTTTT ATGGATTCCC GGAGCCGGCG AAAAGCCTTT TTCCCTTGCG 
GAAGCCGATC CTATAAGCCT TATCATAAAA AAACGCGGCC CCTTTACGGA AGCTCTTTTT 
GAGCTAAAAG CAGGAGATAC AATCTATATG CGGGGCCTTT ACGGCAAAGG AATAAAACCT 
CCTAAAACTG AAAATGCTCT TTTAATTGCA GGCGGAACTG GTATTGCAGT CCTTCCTGCC 
CTTGCAAAAC GCTTAAAAAA GCAAGGAGCC TTAGTCTCTA CCTATGTGGG AACTTCCGAA 
GAAATTAAAA AAAAGGAGCC CAACGGTATC GAAAAAATTC TTATTGAATG CGGCGCCTAT 
AAAAAGGTTG CCGACAAGGG TGTTATCGGC AGGGTGCTAA ACCAATTCCA AAAAGACAAT 
ATTGAAGGAA ATACCGGCCT CCCGATTCAG GGAAAAGCCG AAAAGATGGG CAAGCAGGAC 
TTTTTTACGG CCTATCTGGT AGGGCCTATG ATTTTTATGC GCAGGGCTTC CGAAATTCTT 
TTAAAATTGG GAGTCCGCAA ATCTCAGATT TTTATGTCAT TAGAGATGAA CACGATGTGC 
GGGGTTGGTA TTTGCGGAGA ATGTTCTTGC GGAAATATCT TGACCTGCAA AAAGGGGACA 
TTTGTCAGTC TTGATCAAAT TGACTCCGTT TATTAG 

 

Protein sequence

MRSKAEIIQK IKNAGLAARE GRSAPVLATV SGVLSTKPNL IRYCADELGF GLVTTKSFQV 
LPNPGNREPI LCEPELGCFG NSVGLRNCGM EQAVKELKEL RSSWKTDSIL NVSLSASNPE 
DFISLLKGFE ELADCFELNF SCPHASAGFG ASIGCDPAIA AEYVKIIKKA LPDCAVPIFV 
KLTPNVEDIG AIASAVIEAG ADGITAINTV GPKVYIEPHS GKPILQNKLG GKGGMSGAWV 
FPRALECIGQ IRKAVGEEIP IIGMGGVMTG AQAAELVRAG ADIIGIGSAC GMLEQDDLKP 
FFQNLASDAL NCIRGKETDK TSSFLRKKRA LEYEAKTIVK IEKESEDIII ITLNGKCKFE 
AGQFVFLWIP GAGEKPFSLA EADPISLIIK KRGPFTEALF ELKAGDTIYM RGLYGKGIKP 
PKTENALLIA GGTGIAVLPA LAKRLKKQGA LVSTYVGTSE EIKKKEPNGI EKILIECGAY 
KKVADKGVIG RVLNQFQKDN IEGNTGLPIQ GKAEKMGKQD FFTAYLVGPM IFMRRASEIL 
LKLGVRKSQI FMSLEMNTMC GVGICGECSC GNILTCKKGT FVSLDQIDSV Y