Gene TDE0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0977 
Symbol 
ID2740549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1000555 
End bp1001700 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content52% 
IMG OID637159851 
Producthypothetical protein 
Protein accessionNP_971587 
Protein GI42526489 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000230443 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGT TTAAAACAAA ACACAAGGCA CACGCCTTGA GAAAAACGGG AGCCGCGGTG 
CTCATCACAG CCGCACTTTT GGCAGTAGGG CTGCTTTTTA CCAGCTGCAA ACAGGCATCG 
GGAAGCAACA GTTCAGATTC CGGCGGATCA AGCGGAGGAG GAACTGTGCC CACACCGCCG 
AGCTATGACT TTCCAGAAAT AACCCCGCCT GCAAACGGCA TCGTAGGCGT TGACCCTAAC 
TACCTCCCGA CCGAAACTGA CGATTATTTG AAAGGCGTAT TCCGTGCCGG CCGCAAGGTA 
AAATTAAGCC CCTACAAGCT GGGCAAGACA GAGGTAACGT ATGAGTTATG GCATTCTGTG 
CGTACATGGG CAGAAAGTAA AGGCTACAGC TTTGCAAACA AGGGACTTGA AGGCTGGGAC 
GGCACAGGCG GTGGAGGTAT TTGGCCTAAC TATGCAAATA TCGGCAAGCC TCCTACAACA 
AATAAAAATC ATCCTGTAAC GATGGTAGAC TGGAGGGACT GCATAGTGTG GTGTAATGCG 
TATACTCAAA TGATATATAG CTCCGAAGCC GAATGCGTAT ACCGTAAAAG CGATAGCGAT 
CCTACGGTAT TAAAAGATGC AACGGATGGA ACTGCTTGCG ATGCTGCATA CGCCGATATG 
AATAAAAAAG GCTTTAGACT TCCGACCGAA GCCGAGTGGG AATATGCAGC CCGCTGTCAG 
GGAAGCGACA ACACAAATGC GGCACAATAC GGAGATGTAT GGCTTACCAA GCTGGACAGT 
GCAAGCGGAG CAAAAGCGAA TTGGTGGTAT GATGCCAAAG AAGCAGGAGC TGTTGCGTGG 
TATAAGGGTA ATGCAGGCGA TAAAACCCAT CCGGTAGGAG GAAAAAGGGA GAATGCTCTT 
GGTCTATTTG ACATGGCGGG AAATGTTTGG GAATGGTGTT TTGACCGGTA TGACAGCATA 
GGAACAGGAG AGGTTACCGA CCCGACCGGG GCAGCGTCGG GTACTAAGCG CGTCATACGC 
GGCGGCTGCT GGAACAGCAC CAGCTGGTGC GGCGACAGGA ACGACTGCAC TGTAGGCTTT 
CGGGGCGACT GCAGTCCTGG CAGCGGGTAC AACAGTGTTG GCTTCCGGCT GGCTTGGCGC 
CCTTGA
 
Protein sequence
MTKFKTKHKA HALRKTGAAV LITAALLAVG LLFTSCKQAS GSNSSDSGGS SGGGTVPTPP 
SYDFPEITPP ANGIVGVDPN YLPTETDDYL KGVFRAGRKV KLSPYKLGKT EVTYELWHSV 
RTWAESKGYS FANKGLEGWD GTGGGGIWPN YANIGKPPTT NKNHPVTMVD WRDCIVWCNA 
YTQMIYSSEA ECVYRKSDSD PTVLKDATDG TACDAAYADM NKKGFRLPTE AEWEYAARCQ 
GSDNTNAAQY GDVWLTKLDS ASGAKANWWY DAKEAGAVAW YKGNAGDKTH PVGGKRENAL 
GLFDMAGNVW EWCFDRYDSI GTGEVTDPTG AASGTKRVIR GGCWNSTSWC GDRNDCTVGF 
RGDCSPGSGY NSVGFRLAWR P