Gene TDE0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0960 
Symbol 
ID2740768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp982516 
End bp983655 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content37% 
IMG OID637159834 
ProductneuB family protein 
Protein accessionNP_971570 
Protein GI42526472 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGGGA AATACGGATA CTTTAAACTC GGTTCGGAAA TTTTTTCAGT AGAAAATCCT 
CTTACGATTG CCGAAATAGG AACAAGTCAT AACGGATCTA TTCAAAAAGC AAGGAATTTA 
ATAGATGTGG CTGCTGAAGC CGGAGCAAAG GCTGTAAAAT TTCAAATTGT TTATGCCGAT 
GAAATTCTTC ATCCGAACAC GGGCTATGTG GATTTGCCTA CGGGGAAAAT TCCTCTATAT 
GATCGTTTTA AAAGTTTGGA ACTTCCTGTA AGCTTTTACA AAGAGCTTGC CGAATACAGC 
CGATCAAAAA AACTTTTGTT TTCGGCCAGC CCCTTCGGAT TTAGATCTGC TGAGGAACTT 
GCCGCATTAA AACCCGATTT TATAAAAATA GCTTCACCAG AACTTAATTA TGTACAGCTT 
TTAAAATACT GCGCTGGTTT TAATATCCCT ATGATTTTAT CGAGCGGGGT TTCCATTTTA 
AAAGATATTG AAAAGGCTGT CAGTTTTTTA CGTTCTGAAA ATAAGGATTT GCCTCTGGCC 
CTGCTTCACT GTATTACATC TTATCCTGCA CCCGAAAAGG AATACAATGT TTCGGTAATA 
AAAAACTTGA GCCGTATCTT CGGTATTGCA TGCGGAGTAA GTGATCATTC TTTAGATCCG 
ATTTTAGTTC CGGCCTTAAC GCTCGCAGCA GGCGGTTTTA TAATAGAAAA ACATATCTGT 
CTTTCCCGTA AAGAAGAAGG CTTGGATGAT CCTGTTGCCT TAGAACCTGA TATGTTTAAA 
AAAATGTGCT CCGCCTTAAA TTCCTTTTCA AAAAAAACTT ATGATGAAAT TATAGAGGGT 
TTAACAAAAT TAAACTATTC TATTGAGCTT ATAAACGAAG TTATAGGATC GGGAGAAAAA 
AAATTGAGTC CGGCTGAAAC TAAAAACTAC GGACGCACAA ATAGGTCTAT TCATTATCTT 
AACGATTTAA AAAAGGGAGA TGTAATAACC GATAAGGATA TTGCCGTTTT AAGAACGGAA 
AAAATTTTAT CGCCGGGGGA GGCTCCTGAG ATGTTCGATA GTTTTATCGG AGCCGTTTTA 
CAAAGAGCCG TTAAGTCCGG TGAAGGATTG TTAATGGAAG ATTTTCTTAC AAGGAAATAA
 
Protein sequence
MCGKYGYFKL GSEIFSVENP LTIAEIGTSH NGSIQKARNL IDVAAEAGAK AVKFQIVYAD 
EILHPNTGYV DLPTGKIPLY DRFKSLELPV SFYKELAEYS RSKKLLFSAS PFGFRSAEEL 
AALKPDFIKI ASPELNYVQL LKYCAGFNIP MILSSGVSIL KDIEKAVSFL RSENKDLPLA 
LLHCITSYPA PEKEYNVSVI KNLSRIFGIA CGVSDHSLDP ILVPALTLAA GGFIIEKHIC 
LSRKEEGLDD PVALEPDMFK KMCSALNSFS KKTYDEIIEG LTKLNYSIEL INEVIGSGEK 
KLSPAETKNY GRTNRSIHYL NDLKKGDVIT DKDIAVLRTE KILSPGEAPE MFDSFIGAVL 
QRAVKSGEGL LMEDFLTRK