Gene TDE0955 details

Gene Information

• Locus tag: TDE0955
• ID: 2740763
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 978982
• End bp: 979590
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637159829
• Product: LemA family protein
• Protein accession: NP_971565
• Protein GI: 42526467
• COG category: [S] Function unknown
• COG ID: [COG1704] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAGG GTTTAAAAAT CGGATTGATT ATTGTGGCTG TCGTTCTTGT TTTGGCTTTC 
AGCTTATATA ATTTTTTTGT AGGAACATAT AATTCTATTG TTAAAGCAGA AGAAGGTGTA 
AAGTCTGCAT GGAGTCAGGT AGAAAATGTT TATCAAAGAC GTTTTGATTT AATTCCTAAC 
TTGGTAAATA CTGTAAAGGG CTATGCAAGC CATGAAGCTA AGGTGTTTAC GGATATCGCA 
GAAGCAAGGT CAAAGGCCGG CGGTGTTATG CAGGTTTCCG ATGAGGTTTT AAATAATCCG 
GAATCATTTG AAAAATTTCA ACAGGCTCAA AGCGAACTTG GTGCAGCCTT ACAGCGTTTG 
TTGGTTATTA CCGAAAACTA TCCTGAACTT AAGGCAAATC AAAACTTTAT GGATTTACAA 
ACCCAGCTTG AAGGAACGGA AAACCGTATT GCCGTTGAAC GCAAAAGATA TAACGAAGCC 
GTTCAATCAT ACAATGTTTA TATAAGACAA TTCCCGCGTT CCATTATTGC AAATATGAAC 
GGCTTTAGAG AAAAGGCTTA TTTTAAGGCT GATGATCAAG CATCGACCGC TCCTAAAGTC 
AACTTTTAA 

 

Protein sequence

MGKGLKIGLI IVAVVLVLAF SLYNFFVGTY NSIVKAEEGV KSAWSQVENV YQRRFDLIPN 
LVNTVKGYAS HEAKVFTDIA EARSKAGGVM QVSDEVLNNP ESFEKFQQAQ SELGAALQRL 
LVITENYPEL KANQNFMDLQ TQLEGTENRI AVERKRYNEA VQSYNVYIRQ FPRSIIANMN 
GFREKAYFKA DDQASTAPKV NF