Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0951 |
Symbol | |
ID | 2740759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 974392 |
End bp | 975438 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637159825 |
Product | putative lipoprotein |
Protein accession | NP_971561 |
Protein GI | 42526463 |
COG category | [R] General function prediction only |
COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTCAGCCA TGAGAAAGAT TATTAATTTT ATTTTATTTG CTTCTTTTCT TTTAGCTGTT TTTTCATGTG CAAAAACTGA AAATCTGCAA AAAGAAAAAG AAATCGCTAT TGCGGTTTTT GTTCCCGGTG TCAGGGCTGA AAGTCCTGTC TATGATATGT TGTCTTCCGG CGTAGAGGAA GCCGTTGCTT CTGCAATCGG AAACGGCAAA AAAGTAAGTT TAAAGATTTT AGAAGCCGGA ACCAATCAGG CGGAATGGGG AACAAAACTT ACTTCTCTGG CCGTGGACGG AAAATATGAT TTGATTGTTT CTTCCAATCC CGCTATGCCC GGTATCGCAG CTCCTATTTC TAAGCAATTC CCCAATCAAA AATTTTTGCT CTTGGATGCA TACTCTGAAG GAAATCCTAT GATTACTACC TTTAGATACA ATCAAAGAGA GCAGGCTTAT ATAGCGGGAC ATATTTCTGC CTTGGTAAGT TTAAGCAAGA TGGAATTTGC AAATCCCGAA AAGAAAATCG GACTCATAGC AGGACAAGAA TACCCTGCAA TGATGAATAT AATTTTACCT GCCTTTATTG AGGGAGCTAA GGCCGTCGAT CCCGAATTTA CAGTCGATTT TAAAATTGTA GGAAACTGGT ATGATGCAGC GAAGGGAGCC GAGCTTGCCC GTGCAATGTA TAAAAACGGA GCGGATGTAA TTATGCCTAT TTCGGGCGGT GCAAATCAAG GTGTTCTTGC GGCTGCCAAG GAGTTGGGTT TTTATGTTTC ATGGTTTGAC GATAACGGTT ATGCAAAAGC GAAAGGCTAT GTAATTTCAA GTTCCGAAAT GAAACAAAAA AAACTTGCAT ACGAGCAAAT TTTGAACTTC ATCGACGGAA AATTACAGGA AGGAACAGCT TCTACCCTAG GTATCAAAGA AGGTTATGTA AATTTTGTTT CGGATGATGA GATTTATATT CAAACAGTTC CCGAAGAAAT CAGAAAACAA CAAGATGAAA TTTTAAAGAA AATAGTTGAC GGTTCTTTGG ACTTGTCGGT AAAATAA
|
Protein sequence | MSAMRKIINF ILFASFLLAV FSCAKTENLQ KEKEIAIAVF VPGVRAESPV YDMLSSGVEE AVASAIGNGK KVSLKILEAG TNQAEWGTKL TSLAVDGKYD LIVSSNPAMP GIAAPISKQF PNQKFLLLDA YSEGNPMITT FRYNQREQAY IAGHISALVS LSKMEFANPE KKIGLIAGQE YPAMMNIILP AFIEGAKAVD PEFTVDFKIV GNWYDAAKGA ELARAMYKNG ADVIMPISGG ANQGVLAAAK ELGFYVSWFD DNGYAKAKGY VISSSEMKQK KLAYEQILNF IDGKLQEGTA STLGIKEGYV NFVSDDEIYI QTVPEEIRKQ QDEILKKIVD GSLDLSVK
|
| |