Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0941 |
Symbol | |
ID | 2740974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 963713 |
End bp | 964192 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637159815 |
Product | NLP/P60 family protein |
Protein accession | NP_971551 |
Protein GI | 42526453 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.33367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TATTTATTTT TGTTCTTTTA AGCTTTTTTT TAAACGGATG TATGACTTTT GGAGCTCAAC CGCCCGAATC TCCGCGTCTC GATTTTATAA ATGCTGCATA TAAATACCTA AAAACTCCAT ATAAATATGC AGGCACTACT AAGGCCGGAA TGGATTGTTC AGGTTTTGTA TATAGGGCAG CTCTTGACGC TCTCGAAATT AGCATCCCCA GAAGCACAAA GGGTCTTGCA GACTTTGCTA AACGGATCTC GGACAAAGAA GTTCAACCCG GCGATCTTTT ATTTTTTTAT ACTGTGGGAA ACAAAGTATC ACACGTAGGA ATTTACATAG GTAACAGGGA ATTCATCCAT TCCGCTTCGC AGGGTAAACA TACAGGTGTA ATAATTTCTT CTCTTGATGA AAAATATTGG AAAGACACGT ACCGCTTTGC CGGCCGTATT TTGGATCCGG AAGATATTTT TAACGAATAA
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Protein sequence | MKKIFIFVLL SFFLNGCMTF GAQPPESPRL DFINAAYKYL KTPYKYAGTT KAGMDCSGFV YRAALDALEI SIPRSTKGLA DFAKRISDKE VQPGDLLFFY TVGNKVSHVG IYIGNREFIH SASQGKHTGV IISSLDEKYW KDTYRFAGRI LDPEDIFNE
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