| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0930 |
|---|
| Symbol | |
|---|
| ID | 2740395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 952933 |
|---|
| End bp | 953778 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637159804 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_971540 |
|---|
| Protein GI | 42526442 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1284] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0214742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAA AATTATTAAG TTTTTTTTAC ATTGTTTGCG GAGTTTTGAT GATAGCATCA
GGTATTCATT TTTTCTTGCT GCCTTCAAAA TTATCCTTGG GCGGGGCTAC GGGAATGGCC
TTGGTATTGT CAAAATACCT TCCGCTTTCT ACAGGAGCCC TACTTGTTGT AGTAAACATT
TTTCTGTTTG CTCTCGGCTT TTTAATCATC GGAAACAAAT TCGGTCTTAA AACGGTTTGT
GCGAGCCTTG GACTTTCAGG AGCGGTATGG CTTTTAGAAA TTTTTGTTCC ATTGCAGGGA
CCGATTGTAA ACGACAAATT CTTACAGCTG GTAATTGCCG TCATCCTTTA CGGGGGAGGC
GTAGGCATAG TTTTAAATCA GTATGCATCA ACCGGAGGAA GCGATATCTT TGCAATGATT
CTGCAAAAAT ATTTCGGCCT CGACTTGGGA AAAGGCTGCT TAATTACGGA CTTTACCATT
ACAGTTTTTG CGGGCTTTGC TTACGGCCCG GAAATAGCCT TGTTTTCGTT GGTGGGTGTA
ATCATAAACG GGCTCGTAAT CGACTCTACA ATCGACGGCC TTAACATGAG TAAATACTGC
GTTATAAATA CGGATAAGCC CGATGAGCTT TGCCGATTTA TGGTGGAACT AGGCCGTTCT
GCAAACGTAT ATAAGGCAAC GGGGGCTTAC ACAAGAGCCG AACGCTCGGT TATTCAAACC
GTTATGAGCC GCAGGGACTT TGTAAAGTTA AAAAGCTATC TTGCCGCAAA CGACCCTAAA
GCCTTTATGG TTGTAACAAA CGCCCACTCC GTATTCGGCT GGCATTGGAG AAGGATAGGC
GAATAA
|
|---|
| Protein sequence | MKEKLLSFFY IVCGVLMIAS GIHFFLLPSK LSLGGATGMA LVLSKYLPLS TGALLVVVNI
FLFALGFLII GNKFGLKTVC ASLGLSGAVW LLEIFVPLQG PIVNDKFLQL VIAVILYGGG
VGIVLNQYAS TGGSDIFAMI LQKYFGLDLG KGCLITDFTI TVFAGFAYGP EIALFSLVGV
IINGLVIDST IDGLNMSKYC VINTDKPDEL CRFMVELGRS ANVYKATGAY TRAERSVIQT
VMSRRDFVKL KSYLAANDPK AFMVVTNAHS VFGWHWRRIG E
|
|---|
| |