Gene TDE0924 details

Gene Information

• Locus tag: TDE0924
• ID: 2740389
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 945841
• End bp: 947724
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637159798
• Product: ABC transporter, ATP-binding/permease protein
• Protein accession: NP_971534
• Protein GI: 42526436
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00295449
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGATA AACAAAACCG GCCGGCACAG AAAAATACTG AACGAGACCC GGCAAAGCAG 
CAGGCGGAAC GAAACCCTGC AAAACAGAAA ACCATCAAGC GACTTTTAAG CTACGCGGGA 
AAAAGCAGAG GGCTTTTGCC ACTGTCGCTT ATGCTTTCAG GCTTGAGTGC CCTTGTGAGC 
TTTGTGCCGT ACATTATGGT GTTCTTTGTA ATGCGCGATG TGATTGCCGC CGCCGTAGCA 
AAAGAAGCGG TAAACGCCGC CTCCCTTACA CGCTACGGAC TGTGGGCAGT CGGCTCCGCG 
GCGGCGGGCT TTGTGTTGTA TTATGCAGCG CTCATGCTTT CGCATGCGAC GGCATTTACC 
ATTCAAGAAA ACCTTTCGAT ACGGATGGCC GAAGCACTGG CGGAACTTCC CATCGGCTGG 
CATATCACGC ACGTAAGCGG CAAGGTGCGC AAAGTGTTTG AAAAAAACGT CAATCAACTT 
GAAACGCTCA TCGCTCATAA CCTGCCCGAT ACGGCACAGA ACATGGTGTC TCCTTTTGCG 
ATACTCGCGC TCATGTTGGT ATTCGATTGG CGGCTCGGAC TTATTTCCCT ATTGCCGCTT 
GTGCTTGCTT TCGTGCTGCA AGCGGTTTTA ATGCAAATCA GTTCAAATTC CGGCTTTATG 
CAAAAGTACG AAAATGCACT TGAGCAGATG AACAATGCGG GCACCGAATA CGTACGCGGC 
ATTTCGGTTA TCAAAACCTT TAATCAGTCC GTGTATTATT TCAAAAACTT TTACACTTCT 
ATTATGAACT ACAAAGAATT TGTGTATAAA TATTCGCTGT CGTGGGAAAA CGGCTATTCG 
ATTTTCCTCG CACTCGTTAA AGCGGGCTTT CTATTCCTGC TGCCTGCCGC TCTGTTGATA 
GCGGGCAGTG CGACGCTCGA TCCTCGCTTT TTTTACAGTT TTGTGTTTTA TCTTGCCTTT 
GCACCGGTTA CCTACACCAT GCTGATGAAA GTTATGTATG CAAATTCATT CAATCAGCGC 
TCAAACGATG CGCTCAACCG TATTGAAGAT ATCTTGCAAG CGCCGCTGAC CAAAGAACCG 
GAAAAGTCCG TATTGCCCGA AAAATACGAT ATAGAATTTA GAGACGTAGT GTTTTCTTAT 
AAAACGGAAA CGGCGGGATC TGCGGAAACG GACACAGGGA ACAAGGGCCG CGCCACAGTG 
AACGGCATCA GCTTGCATAT TCCCGAACAT TCGCTTACCG CTCTTGTCGG ACCTTCAGGT 
GGAGGCAAAA CGACCCTCGT CAATTTGCTC GGCCGCTTTT GGGAAATTGA TTCAGGGGAA 
ATCAGTATCG GCGGTGTCGA TATCCGCGAC ATTAAAACAA GCGACCTTTT GCACACCGTC 
GGCTTTGTGT TTCAAGAAAA TAAGCTCTTT AAAGAAAGTA TTTTTGAAAA CATCCGCTAC 
GGCAAAAAAG ACGCAAGCCG AGAAGAAGTG ATGGAAGCCC TCCGTAAAGC CGAGTGCATG 
GACATCATCG AAAAACTGCC TGCCGGTATC GACACCGTGT ACGGAACTAA GGGCACATAC 
GTATCAGGCG GAGAAGCACA GAGGCTTGCC ATTGCCCGCA CCCTCTTGCA GGACGCACCG 
ATTATCGTGC TGGACGAAGC AACCGCCTTT GCCGACGCCG AAAACGAACA CAAAATCAAA 
AAGACATTCG ACGTACTGCT CAAAGATAAA ACCGTCATCA TGATCGCCCA CCGCCTCTCT 
TCGGTTGTAA ACGCCGATAA AATCTGTGTC ATCAACGAGG GCAAAATTGA AGAAGAAGGC 
ACGCACACCG AACTGCTCGC ACGGAAGGGC TTGTACGCAA GTATGTGGGA TAATTTCCAA 
AAAGGCATCG AGTGGAAAGT ATAG 

 

Protein sequence

MNDKQNRPAQ KNTERDPAKQ QAERNPAKQK TIKRLLSYAG KSRGLLPLSL MLSGLSALVS 
FVPYIMVFFV MRDVIAAAVA KEAVNAASLT RYGLWAVGSA AAGFVLYYAA LMLSHATAFT 
IQENLSIRMA EALAELPIGW HITHVSGKVR KVFEKNVNQL ETLIAHNLPD TAQNMVSPFA 
ILALMLVFDW RLGLISLLPL VLAFVLQAVL MQISSNSGFM QKYENALEQM NNAGTEYVRG 
ISVIKTFNQS VYYFKNFYTS IMNYKEFVYK YSLSWENGYS IFLALVKAGF LFLLPAALLI 
AGSATLDPRF FYSFVFYLAF APVTYTMLMK VMYANSFNQR SNDALNRIED ILQAPLTKEP 
EKSVLPEKYD IEFRDVVFSY KTETAGSAET DTGNKGRATV NGISLHIPEH SLTALVGPSG 
GGKTTLVNLL GRFWEIDSGE ISIGGVDIRD IKTSDLLHTV GFVFQENKLF KESIFENIRY 
GKKDASREEV MEALRKAECM DIIEKLPAGI DTVYGTKGTY VSGGEAQRLA IARTLLQDAP 
IIVLDEATAF ADAENEHKIK KTFDVLLKDK TVIMIAHRLS SVVNADKICV INEGKIEEEG 
THTELLARKG LYASMWDNFQ KGIEWKV