Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0916 |
Symbol | |
ID | 2740381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 933499 |
End bp | 935244 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637159790 |
Product | ABC transporter, ATP-binding/permease protein |
Protein accession | NP_971526 |
Protein GI | 42526428 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.953809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAAA CGGTGCGGGC TTTTTTGACC CTTATGCAAA ATCAAAAAAA GGAAATTGTT TTTTCCGTTG TATTAAGTTT TATCGACGGC TTTTTTATAA TGATACCTTT TATCATCGCC TTTAAAATTG TAAACGCCGT ACCGCTTTTT AATCCCGCCG CTTCGGGAAC GCTTGATGTC CGCACTATGT ACCGGTACAT CGGCATTATG GCGGCAGCGG TTTTTATTAG AATTGTACTG CGTTACTTTA CGCTCTATTT CCGCGGCGGG GCAGGTTATA AGGCAATGTG CCGCGAGCGT AAAAACTTAG GAACACGATT ACGAAAGGTA TCGCTCGGCT TTCTCAATGA AAAAAACACG GGCGACTTGG TTTCGACCAT TACTTCCGAT GCGGCGTTTT TGGAAATTGA AGGCATGGTC GTTATCGAAA AAATCGCCGT GGGTATTCCT GTTTTTGCTA TCGGACTTAC TGTCTTGCTT GTCTTCGATT ACCGCATCTT TTTGCTCACC GCTTTTTTGT TTATTCCGGT ATGGTACATG TACAGAAAAT TATCTACATT GCAAGACAAG TTAAAAATAA ACCGGCAGGA CTTTATCGGA AAAGTTACCG CCGATATTGT TGAATTTATC AACGGGATCC ATGTGCTTAA AATATACAAC ATGGCGGAAA AGCGGTTTTC AAAAACGGCT GAAGCGGTAA AGAATTTACG GGATTTTTCC GTCCGCGCGG AACTTGCTCA TATTCCTGTC GTCTCTCTTT TTCAGTTTTG CTTACGGCTT GTTACGGCGG GAATAGTTTT TTCTTCCGCC CTGCTTTTTT TACGGGGAAC ACTTTCTTTT GCACAAATCT TTTTGCTGAT GACCGCCTCT TTCAGTTTGT TTAGCGGTAT TGAAGCGATG GGGATTTTCA GTATCTTTTC TAAAATGACT CAGCAGTCAA TCGACCGTAT GAATGCCATC AAAGCGGTTC CGGAAATGCA AAACCTTTCA GGGAACCTGC TGCTCGATCC TCAAAATCCG CACGCCTTCG ATATTCAATT TGAAGATGTT TCTTTTGCCT ACGCCGAAAA AGAGGTGCTG CATAATATCA GCTTTTCAGT TCCAGAAAAA ACGGTAACCG CTCTTGCAGG TCTTTCGGGG AGCGGCAAGA CGACTATTGT GAATCTGCTT GCTCGTTTTT GGGATATAAA AAAGGGGCGC ATCAGTATCG GCGGCACCGA TATTAAAGAA CTCAATTACG AAAACCTTTT GCACAATATC AGCTTTGTGT TTCAGGATGT GTTTTTGTTT AACGACACGA TATTGAATAA TATCAGGCTC GGCCGGGAAA CCGCTTCTTT GGAGGAAGTG TATCAGGCGG CTGAGCGTGC GGGCTGCACC GATTTTATTA TGCAAAGTGA AAAGGGCTAC GATACGGTTA TAGGAGAGGC GGGCTTGCGG CTTTCGGGCG GAGAAAAACA GCGCATTTCG ATTGCCCGTG CTTTTCTTAA AAATGCCCCG ATTGTACTAT TGGACGAGGT AATCGCCAAT GTTGATGCGG AAAACGAAGC CAAAATACAA GCCGCCTTAC AGGAATTGCT CAAAGATAAA ACCGTCATCA TGATTGCTCA CAATCTGACA AGTCTCCGCA ACGCCGGCCA AATTCTGGTC CTCGAAAATG GGCACATTGT TCAGTGCGAC AGGCATGAGG AGCTGATAAA AGAAGAAGGT TTATATAGAA AATTGTGGGA AGAATCCAAG AACTGA
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Protein sequence | MLKTVRAFLT LMQNQKKEIV FSVVLSFIDG FFIMIPFIIA FKIVNAVPLF NPAASGTLDV RTMYRYIGIM AAAVFIRIVL RYFTLYFRGG AGYKAMCRER KNLGTRLRKV SLGFLNEKNT GDLVSTITSD AAFLEIEGMV VIEKIAVGIP VFAIGLTVLL VFDYRIFLLT AFLFIPVWYM YRKLSTLQDK LKINRQDFIG KVTADIVEFI NGIHVLKIYN MAEKRFSKTA EAVKNLRDFS VRAELAHIPV VSLFQFCLRL VTAGIVFSSA LLFLRGTLSF AQIFLLMTAS FSLFSGIEAM GIFSIFSKMT QQSIDRMNAI KAVPEMQNLS GNLLLDPQNP HAFDIQFEDV SFAYAEKEVL HNISFSVPEK TVTALAGLSG SGKTTIVNLL ARFWDIKKGR ISIGGTDIKE LNYENLLHNI SFVFQDVFLF NDTILNNIRL GRETASLEEV YQAAERAGCT DFIMQSEKGY DTVIGEAGLR LSGGEKQRIS IARAFLKNAP IVLLDEVIAN VDAENEAKIQ AALQELLKDK TVIMIAHNLT SLRNAGQILV LENGHIVQCD RHEELIKEEG LYRKLWEESK N
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