Gene TDE0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0916 
Symbol 
ID2740381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp933499 
End bp935244 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content44% 
IMG OID637159790 
ProductABC transporter, ATP-binding/permease protein 
Protein accessionNP_971526 
Protein GI42526428 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.953809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAAA CGGTGCGGGC TTTTTTGACC CTTATGCAAA ATCAAAAAAA GGAAATTGTT 
TTTTCCGTTG TATTAAGTTT TATCGACGGC TTTTTTATAA TGATACCTTT TATCATCGCC
TTTAAAATTG TAAACGCCGT ACCGCTTTTT AATCCCGCCG CTTCGGGAAC GCTTGATGTC
CGCACTATGT ACCGGTACAT CGGCATTATG GCGGCAGCGG TTTTTATTAG AATTGTACTG
CGTTACTTTA CGCTCTATTT CCGCGGCGGG GCAGGTTATA AGGCAATGTG CCGCGAGCGT
AAAAACTTAG GAACACGATT ACGAAAGGTA TCGCTCGGCT TTCTCAATGA AAAAAACACG
GGCGACTTGG TTTCGACCAT TACTTCCGAT GCGGCGTTTT TGGAAATTGA AGGCATGGTC
GTTATCGAAA AAATCGCCGT GGGTATTCCT GTTTTTGCTA TCGGACTTAC TGTCTTGCTT
GTCTTCGATT ACCGCATCTT TTTGCTCACC GCTTTTTTGT TTATTCCGGT ATGGTACATG
TACAGAAAAT TATCTACATT GCAAGACAAG TTAAAAATAA ACCGGCAGGA CTTTATCGGA
AAAGTTACCG CCGATATTGT TGAATTTATC AACGGGATCC ATGTGCTTAA AATATACAAC
ATGGCGGAAA AGCGGTTTTC AAAAACGGCT GAAGCGGTAA AGAATTTACG GGATTTTTCC
GTCCGCGCGG AACTTGCTCA TATTCCTGTC GTCTCTCTTT TTCAGTTTTG CTTACGGCTT
GTTACGGCGG GAATAGTTTT TTCTTCCGCC CTGCTTTTTT TACGGGGAAC ACTTTCTTTT
GCACAAATCT TTTTGCTGAT GACCGCCTCT TTCAGTTTGT TTAGCGGTAT TGAAGCGATG
GGGATTTTCA GTATCTTTTC TAAAATGACT CAGCAGTCAA TCGACCGTAT GAATGCCATC
AAAGCGGTTC CGGAAATGCA AAACCTTTCA GGGAACCTGC TGCTCGATCC TCAAAATCCG
CACGCCTTCG ATATTCAATT TGAAGATGTT TCTTTTGCCT ACGCCGAAAA AGAGGTGCTG
CATAATATCA GCTTTTCAGT TCCAGAAAAA ACGGTAACCG CTCTTGCAGG TCTTTCGGGG
AGCGGCAAGA CGACTATTGT GAATCTGCTT GCTCGTTTTT GGGATATAAA AAAGGGGCGC
ATCAGTATCG GCGGCACCGA TATTAAAGAA CTCAATTACG AAAACCTTTT GCACAATATC
AGCTTTGTGT TTCAGGATGT GTTTTTGTTT AACGACACGA TATTGAATAA TATCAGGCTC
GGCCGGGAAA CCGCTTCTTT GGAGGAAGTG TATCAGGCGG CTGAGCGTGC GGGCTGCACC
GATTTTATTA TGCAAAGTGA AAAGGGCTAC GATACGGTTA TAGGAGAGGC GGGCTTGCGG
CTTTCGGGCG GAGAAAAACA GCGCATTTCG ATTGCCCGTG CTTTTCTTAA AAATGCCCCG
ATTGTACTAT TGGACGAGGT AATCGCCAAT GTTGATGCGG AAAACGAAGC CAAAATACAA
GCCGCCTTAC AGGAATTGCT CAAAGATAAA ACCGTCATCA TGATTGCTCA CAATCTGACA
AGTCTCCGCA ACGCCGGCCA AATTCTGGTC CTCGAAAATG GGCACATTGT TCAGTGCGAC
AGGCATGAGG AGCTGATAAA AGAAGAAGGT TTATATAGAA AATTGTGGGA AGAATCCAAG
AACTGA
 
Protein sequence
MLKTVRAFLT LMQNQKKEIV FSVVLSFIDG FFIMIPFIIA FKIVNAVPLF NPAASGTLDV 
RTMYRYIGIM AAAVFIRIVL RYFTLYFRGG AGYKAMCRER KNLGTRLRKV SLGFLNEKNT
GDLVSTITSD AAFLEIEGMV VIEKIAVGIP VFAIGLTVLL VFDYRIFLLT AFLFIPVWYM
YRKLSTLQDK LKINRQDFIG KVTADIVEFI NGIHVLKIYN MAEKRFSKTA EAVKNLRDFS
VRAELAHIPV VSLFQFCLRL VTAGIVFSSA LLFLRGTLSF AQIFLLMTAS FSLFSGIEAM
GIFSIFSKMT QQSIDRMNAI KAVPEMQNLS GNLLLDPQNP HAFDIQFEDV SFAYAEKEVL
HNISFSVPEK TVTALAGLSG SGKTTIVNLL ARFWDIKKGR ISIGGTDIKE LNYENLLHNI
SFVFQDVFLF NDTILNNIRL GRETASLEEV YQAAERAGCT DFIMQSEKGY DTVIGEAGLR
LSGGEKQRIS IARAFLKNAP IVLLDEVIAN VDAENEAKIQ AALQELLKDK TVIMIAHNLT
SLRNAGQILV LENGHIVQCD RHEELIKEEG LYRKLWEESK N