| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0891 |
|---|
| Symbol | |
|---|
| ID | 2739765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 907732 |
|---|
| End bp | 908652 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637159765 |
|---|
| Product | transcriptional regulator, putative |
|---|
| Protein accession | NP_971501 |
|---|
| Protein GI | 42526403 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2378] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTG AACGGATTCT CGAAATAATT ATATACTTAT TGAACCATGA AAAGGTTTCC
GCAAAATATT TGGCAGAGTA TTTTGATGTG TCGGTCAGGA CTATTCAGCG TGATATGGTA
AGCATAGCCG AAGCGGGTAT ACCCGTATAT ACCTTGGGCG GAAGGTATGG CGGCTATGCC
GTTTTGGAAA ATTATAAAAT AAAAAACATC AACATCAAAA ACAGCGAACA GCAAATTATT
ATAAGTGCTT TGGAAAGTCT TGCTACTTCA TATACAAATG ACAAGCTCAA TTCCTTAATC
GAAAAATACA ATGCCATTAT CGAAAAAGAG GGCGGGCAAA AAGTTTTTTG GGATTTTAGC
GTTACAAAAG AAAATAAAAA GGTGCAAGAT TCCAATATGC TTTTGGAAAA AGCCATCGGC
GGTAAGAACT ATATCGTTTT CGATTACCGC AATTCCGAAG GAAAAAGTTC GCATGTTTGT
GCGGAGCCCC TTGCAATTCA TTATAAATGG TATGCATGGT ATTTGTTTGC ATACCCTAAA
GAAACAAAAG AGTATCGAAC CTTTAAGGTT GCTCGGATGC AAAACCTGGT CATCTCAAAA
GAAAGATCAT TTATAAAACA CGGCGATATA CAACAAAAGA TGAAAGAAGC CGAGCTAGCG
TATTATAAAA CCTGCATCAA TATAGAAATT ATTTTTTCCG AAAAAGAAAT TCCGCTCATC
GAAGAGTATT TTCCCGACTC CGTTATCGAA AAACTTTCTT CTCAAAAATG TAAAACCCAT
ATTCATGTTC CTGCAAAAGA ACGGCTGTGG AAGGCCTTAC TCCTTAGCTT CGGAGATGCT
GTAACCGTCG TTTCCCCAAA AGATTATAAA GAAGATCTTA TAAAAACCGC TGAAACTTTT
TTATCTAATT ACGACATATA G
|
|---|
| Protein sequence | MKFERILEII IYLLNHEKVS AKYLAEYFDV SVRTIQRDMV SIAEAGIPVY TLGGRYGGYA
VLENYKIKNI NIKNSEQQII ISALESLATS YTNDKLNSLI EKYNAIIEKE GGQKVFWDFS
VTKENKKVQD SNMLLEKAIG GKNYIVFDYR NSEGKSSHVC AEPLAIHYKW YAWYLFAYPK
ETKEYRTFKV ARMQNLVISK ERSFIKHGDI QQKMKEAELA YYKTCINIEI IFSEKEIPLI
EEYFPDSVIE KLSSQKCKTH IHVPAKERLW KALLLSFGDA VTVVSPKDYK EDLIKTAETF
LSNYDI
|
|---|
| |