| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0884 |
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| Symbol | trmD |
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| ID | 2739758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 902361 |
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| End bp | 903092 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637159758 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | NP_971494 |
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| Protein GI | 42526396 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0230435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGATTCG ATGTGCTGAC CTTATTCCCC GAAATACCCG AAGCTTTTTT TAAAACTTCG
ATTATGGCCA AGGCTGTAGA AAAGGGAATT ATTAGCTGCA ACTTGGTAAA CATCAGAGAC
TTTGCTTTCG ACAAGCACCG CTCATGCGAT GACATCGTTT ACGGCGGAGG GGCCGGAATG
TTACTCTTAC CGGAACCTTT GAGCCTCGCA TTGGACTCGG TTAATGCTTC TTCAAAACGG
GTAATATATG TTACTCCGTC CGGGAAGCCT TTTAACCAAG AGCTGGCAAA AGAGTTTTCT
TCAGAAGAAG CTCTCGTCTT TGTCTGCGGA AGATATGAAG GAATCGATCA GAGAATTATC
GACGAGTATG TTGATGATGA AATCTCGGTC GGCGACTATG TTATGTCCTC AGGCGAGCTT
GCAGCCCTAG TGATAATCGA TGCGGTTTAC CGCCTGATAG ACGGAGTTAT TTCCGGCGAG
TCGCTTGAAG AAGAAAGTTT TTCAGGATTT TTGCTTGAGT ACCCGCAATA TACAAGACCA
AGAAATTTTA AGGGAAAAGA GGTTCCCGAA GTGCTCCTTT CAGGACACCA TCTAAATATC
CATAAGTGGA GGCTAAAAAA GCGTATCGAA AAAACGCTTA AAACTAGGCC CGATCTTATC
GAAAAGGCAA GAAATTGCGG GATGTGGACA AAGGAAGCAG AAAAAATACT TAAGGAGTTT
GAAAATGAGT GA
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| Protein sequence | MRFDVLTLFP EIPEAFFKTS IMAKAVEKGI ISCNLVNIRD FAFDKHRSCD DIVYGGGAGM
LLLPEPLSLA LDSVNASSKR VIYVTPSGKP FNQELAKEFS SEEALVFVCG RYEGIDQRII
DEYVDDEISV GDYVMSSGEL AALVIIDAVY RLIDGVISGE SLEEESFSGF LLEYPQYTRP
RNFKGKEVPE VLLSGHHLNI HKWRLKKRIE KTLKTRPDLI EKARNCGMWT KEAEKILKEF
ENE
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