Gene TDE0872 details

Gene Information

• Locus tag: TDE0872
• Symbol: recA
• ID: 2740919
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 894981
• End bp: 896225
• Gene Length: 1245 bp
• Protein Length: 414 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637159746
• Product: recombinase A
• Protein accession: NP_971482
• Protein GI: 42526384
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0468] RecA/RadA recombinase
• TIGRFAM ID: [TIGR02012] protein RecA

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.396783
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAAAAG CAAAAAACGA AGTACCGGCA GTTGCAAACC CGGATGATAA GTTAAAGGCT 
CTGGAGGCTG CCCGCCTTCA AATCGAAAAA CAATTCGGGC AAGGCTCTTT GATGAAGTTA 
GGGAATAATT CCGCTATCGG AAACATAGAA ATTATTCCTT CGGGAAGCAT CCTTTTGGAT 
GAAGCTCTGG GAATCGGCGG TTATCCCCGC GGCAGAATTA TCGAGATATT CGGCCCCGAA 
TCTTCGGGTA AGACTACGAT AGCTCTTCAT GCCGTCGCCG AGGCACAAAA GCAGGGAGGC 
ATAGCCGCCT TTATCGATGC CGAACATGCC TTGGATCCCC AATATGCAAA AGCCTTGGGA 
GTAAATATTG ATGAGCTTTG GGTTTCCCAA CCCGATACCG GAGAACAGGC CCTTGAAATA 
GCAGAAAGCC TTGTACGCTC CGGAGCCGTG GACGTAATAG TAATTGACTC GGTCGCAGCC 
CTAACGCCTC AGGCAGAAAT TGCCGGAGAA ATGGGAGACT CTCATATGGG CTTACAGGCC 
CGCTTGATGA GCCAAGCCTT GAGAAAACTT ACCGCCATTA TAGGCAAGTC CAACTGTATG 
ATAATATTTA TCAACCAAAT CCGAATGAAG ATAGGCGTTA TGTTCGGAAG TCCTGAAACA 
ACTACGGGAG GAAATGCCCT TAAATTTTAC GCCTCCGTCC GGCTGGATGT ACGGAAAATT 
GAAACTCTCG GCAAGGACGA TGATGAAGCA TGGGGAAATA AGATTCGTGT AAAGGTTGTA 
AAAAACAAGG TCGCTCCTCC TTTTAGAAAG GTAGAAATGG AAATCCTTTT TGGAAAGGGC 
GTTTGTCCCT ATGGAAGTCT CTTGGATTCT GCTGTCAAAC AAGAGATAAT AGGCAAGAGC 
GGGTCGTGGT ATTCTTACGG GGACGACAAA ATCGGTCAAG GCAGGCCCAA TGCCGTTAAA 
TTCTTAGAAG AAAACATAGA CATAGCTCAA AAGATTGAAA AAGAATTGAG AGAAAAACTC 
TTCCCGGGCA GGCCCTTTGT TTCAAGTTTT GTCGAAAAAA CAAAAGAACA AAAAGAAGCC 
CAGGAAAAGG CCGTAGAAGC TCTTAAAAAA GAAGAGGGTT CAAAGGAAGA TGCTCTGACA 
GGCAATAAAG ATGAAACCGA TGATTCCGCT CAAAAAAATT CGGCCGCTTC AAAGGCAAAA 
AGGGCTGAAG TTGTAGGCCT TCCGGCGGAC GACAGTCTTT TTTAA 

 

Protein sequence

MAKAKNEVPA VANPDDKLKA LEAARLQIEK QFGQGSLMKL GNNSAIGNIE IIPSGSILLD 
EALGIGGYPR GRIIEIFGPE SSGKTTIALH AVAEAQKQGG IAAFIDAEHA LDPQYAKALG 
VNIDELWVSQ PDTGEQALEI AESLVRSGAV DVIVIDSVAA LTPQAEIAGE MGDSHMGLQA 
RLMSQALRKL TAIIGKSNCM IIFINQIRMK IGVMFGSPET TTGGNALKFY ASVRLDVRKI 
ETLGKDDDEA WGNKIRVKVV KNKVAPPFRK VEMEILFGKG VCPYGSLLDS AVKQEIIGKS 
GSWYSYGDDK IGQGRPNAVK FLEENIDIAQ KIEKELREKL FPGRPFVSSF VEKTKEQKEA 
QEKAVEALKK EEGSKEDALT GNKDETDDSA QKNSAASKAK RAEVVGLPAD DSLF