Gene TDE0870 details

Gene Information

• Locus tag: TDE0870
• ID: 2740917
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 892838
• End bp: 894736
• Gene Length: 1899 bp
• Protein Length: 632 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637159744
• Product: phosphatase/nucleotidase
• Protein accession: NP_971480
• Protein GI: 42526382
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0599439
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAC GATTGACGTT TATTTTGATT TCCGTCTTTG TTATTTTTTC TTTTACCTCG 
TGTTTGGAGA CCCGTGTAAA AGAGAGCGGT GTAAGGTCAA AGAGGGAAAT GCTTGCAACA 
GGCAAGCAGT CGGATGAGGT TAAGTTAACT CATGCAGTAA TTAGAAAGGG TGAAGCGGGA 
AAGGACAATG TAACCTTGAC CTTCGGTGTA ACCGGAGATG TTCACGGCAG ACTTTATCCT 
TTTGAATATG CTGTTTGCGA AGAGGTACCG GGCGCGGGTT TTTCAAAAAC ATTTACCTTG 
GCTCAAGAGC TAAGAAAGGA AAATCCAAAC ACTGTTCTCA TTGATGTAGG CGATACCGTT 
CAGGATAACA ATGCCGAGCT TTTTAACGAT TTGGAAACCC ACCCAATGAT TCAGGCTCTG 
AACTACATGA ACTATGATAT TTGGGTTTTA GGTAATCACG AATTCAATTT TGAAAAAGAA 
TTTCTTGCAC GTAATATCCG CAATTTTAAT GGGGCAGTTT TGAGCGCAAA TATCAGGAAT 
GAAAAGGATA AGAGCTTTTT TGTTTTGCCT TACCAGTTAT TGGAAGTTGA AGGGGTTAGA 
ATCGCTGTTG TAGGTCTTAT TCCGCCCCAT ATTCCGATGT GGGAATCTTC TTCGCCTTCT 
CACTTCAAAG GGCTGACATT TGAAGAACCC TTGGATGCTG CCCGCCGTAC CGTTGATTCT 
TTAAAAGGTC AATATGATGT TTTGGTAGGC GCCTTTCACT TAGGCCGAAA TGCCGAATAC 
GGTTCTACAG GCGGAGTTAT CGAAATTGCC AAACAAATCC CCGAATTCGA TATAATTTTC 
GGAGGCCATG AACATGCAAG GTATGCAAGT ATAGTTGACG GCGCGGACGG CGATAAGACA 
TGGATAATAG AGCCCGGTGC CTATGGTTGG GCCTTGGCTG TCGGAGAGAT AAAAGTTAAA 
AAAGAAAAGG ACAAGTGGAA GGTTGTTTCG GTAAAGGCTG AGAACAGAGA AACAAAAAAT 
GTTCTGCCTA ATAAACCGAT GGAAGAAGAA TTCAAATTTG TTCATCAAAC TTCTTTAAGC 
GATGCAAATA CCGTAATAGG GAATATAACC GAGGACTTTA TAAAGCGTGT CGATTATATT 
ACGGGCGAGG ATAAGGTTAC TACAATGCCT ACAATACAGT TGGAGGATAC GGCCCTAATA 
GACCTTATAA ATAATGTTCA GCTGTATTAT ACCAAGGCCG ATGTATCGTC TGCTGCGGCC 
TTCCGTTCGG ATATGAATTT AAAGGCAGGC CTTTTTAAGA AAAAAGATGT AGCCTTTATT 
TATAAGTATG CAAATACATT GATGGGAGTA AATATAACCG GTGAGAACCT TTTAAAATAT 
ATGGAATGGT CAGCTTCCTA TTATAATACT ACCAAAAAAG GTGATGTAAC AATTTCTTTT 
GATCCTAAGA TCCGAAGCTA TAATTACGAT ATGTTTGAGG GTTTGACCTA TGATATTGAT 
ATCTCTCAAG CACCTGAAAA CAGGATTAAA AATGCAAGGA TAAAAGGAAA GCCCATCGAT 
CCGAAAAAAA ACTATAAGTT GGCTGTAAAT AACTACCGTT TCGGCACTTT GACAAAACTT 
GGTCTTATAA GCGAAAAAGA TGTTTATTAC GACTCCTATA TGAAAATGCA GGATGCAGGA 
CGTATAAGAG ACTTGATAGT AAAATATGTT AAGGAAGTTT CAAAGGGTGT TATTAAACCT 
GTAACAAACA ATAACTGGAA GATTATAGGC TTTGATCCCG ATGTCAAGGG CAAGGAAGAA 
ATCTTAAACA AGATTAGATC GGGCGAGATA AAGATTCCTA AATCGGAGGA TGGAAGAACC 
CCGAATGTAA AATCCATAAA TATCTATGAA TTAAAATAA 

 

Protein sequence

MKKRLTFILI SVFVIFSFTS CLETRVKESG VRSKREMLAT GKQSDEVKLT HAVIRKGEAG 
KDNVTLTFGV TGDVHGRLYP FEYAVCEEVP GAGFSKTFTL AQELRKENPN TVLIDVGDTV 
QDNNAELFND LETHPMIQAL NYMNYDIWVL GNHEFNFEKE FLARNIRNFN GAVLSANIRN 
EKDKSFFVLP YQLLEVEGVR IAVVGLIPPH IPMWESSSPS HFKGLTFEEP LDAARRTVDS 
LKGQYDVLVG AFHLGRNAEY GSTGGVIEIA KQIPEFDIIF GGHEHARYAS IVDGADGDKT 
WIIEPGAYGW ALAVGEIKVK KEKDKWKVVS VKAENRETKN VLPNKPMEEE FKFVHQTSLS 
DANTVIGNIT EDFIKRVDYI TGEDKVTTMP TIQLEDTALI DLINNVQLYY TKADVSSAAA 
FRSDMNLKAG LFKKKDVAFI YKYANTLMGV NITGENLLKY MEWSASYYNT TKKGDVTISF 
DPKIRSYNYD MFEGLTYDID ISQAPENRIK NARIKGKPID PKKNYKLAVN NYRFGTLTKL 
GLISEKDVYY DSYMKMQDAG RIRDLIVKYV KEVSKGVIKP VTNNNWKIIG FDPDVKGKEE 
ILNKIRSGEI KIPKSEDGRT PNVKSINIYE LK