Gene TDE0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0856 
Symbol 
ID2741367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp877251 
End bp878438 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content41% 
IMG OID637159729 
ProductL-fuculose phosphate aldolase, putative 
Protein accessionNP_971466 
Protein GI42526368 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR00760] L-ribulose-5-phosphate 4-epimerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.668343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTTG ATGAAGCAAA AAGTATCATA ATAGAGACGG GAAAGAGGCT TTTAACGTCC 
GGTCTGACGG TACGTACATG GGGAAATGTA AGCGCCCGTA TAGATGCCGA TACTTTTGCT 
ATTACCCCTT CCGGCTATGG TTATGAGAAT TTAAAGCCTG AACATATAGT TGTTCTTAAA 
ATAAATAGGC CTGAAAGTTC CGGACCTGTC AAACCCTCTT CAGAACGTTT TGTTCATGCA 
AGCCTTTACA AGGCCGACCA AAATATAAAG TTTATAATCC ATACACATCA GAAATTTGCC 
TCAGCTGTTT CGGGATGCTT TTCTTCCATA CCTGTTGAAA ATGAGGAGCT TCATTCCGTC 
TTAGGGGAAG CCGTACCTGT GGCAAGATAT GCTCCTGCGG GTACAAAAAG AATAGCCCGT 
CATATTGTAA AATGTTTAAC AAAACCTGTC GGAGCAATAA TAATGGCCCA ACATGGGGCT 
GTCTGTTTCG GTGCTGATGC GGCGGAAGCC TTTGCCCAAG CCGAGGCTCT GGAAGACCTT 
TGCCGTAATT TGATTTTTGC TGAAGTTCCG GCCCTGGCCC TTGCTTACCG GCGATATGAA 
AGAAAAGCCT TACAGCCCTT GATTAATTTT TACGCAAGCT GCCGTGAAGG CGACTCATGC 
ACCGTTTACG ATAAAAATAC CGATATTACC ATTTGCAAGA TGGATATAAA ATCCGGAAAT 
ATAACTGAAG GCCTTTTTGA TTTTCAAGCC GATTTACATA GACATATATA TGATACCTAT 
CCGGATATTA ACTTTATAGA GCAAAGCTCT CTGCCGGCAG CTCTTTTTGT TTCAAAAAAA 
ATGAACATAG ACAACTGCAT ACCGGCTTTT TTGGATGATT TTGCTCAGAT TGCCGGCGAA 
AATGTTTTTT TGTTTCCATT TTTTGAGAAC CGGGCTGAAG AGATGAGCAC GGAAATTGTA 
GATGCTTTAA AAAACCGCTC TTGCGTTTTG GTAAATGAAA GCGGAGCCCT TTGTTGTGTT 
TCCGATAAGA ATGATATCGG CGCCTTAAAA GAAATCTTGG AAAAAAATCT TTTGGCCCTT 
GTTCTTTCAT GGAAATTTAA AAATTATTTT CCGATAAGCC GTAGGAGTGC TCAAAGAATG 
AGAAGAGGTT ATATCGGAGG ATATTCCAAA ATGAATTTAC AAATTTAG
 
Protein sequence
MTLDEAKSII IETGKRLLTS GLTVRTWGNV SARIDADTFA ITPSGYGYEN LKPEHIVVLK 
INRPESSGPV KPSSERFVHA SLYKADQNIK FIIHTHQKFA SAVSGCFSSI PVENEELHSV 
LGEAVPVARY APAGTKRIAR HIVKCLTKPV GAIIMAQHGA VCFGADAAEA FAQAEALEDL 
CRNLIFAEVP ALALAYRRYE RKALQPLINF YASCREGDSC TVYDKNTDIT ICKMDIKSGN 
ITEGLFDFQA DLHRHIYDTY PDINFIEQSS LPAALFVSKK MNIDNCIPAF LDDFAQIAGE 
NVFLFPFFEN RAEEMSTEIV DALKNRSCVL VNESGALCCV SDKNDIGALK EILEKNLLAL 
VLSWKFKNYF PISRRSAQRM RRGYIGGYSK MNLQI