Gene TDE0854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0854 
SymbolrecX 
ID2741365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp875953 
End bp876621 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content41% 
IMG OID637159727 
Productrecombination regulator RecX 
Protein accessionNP_971464 
Protein GI42526366 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000653811 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAGACG AAGATTCCAG TTCAGCAAAC GTTAATCCTT TTTCTATTGC GGATATATGC 
AGCACTTCTT CAGATTTGGT GAAAATCATC AATTCTGAAG GGGTGTCTTT TGTAACACGG 
CCTGATTATT TTGATGAAGA TGATTTTGAT GGCCTTGTTG GTGAGTGCGG TTGTCCTATA 
AGCGATGAAT CGCTTGAGGC ACTGCTTAAT GCAGTAAGAA TTTATGAGGC TGAGTGTACC 
GCTTCGGCCT ATTTATACAG AGCTGAGCAT TCCCGTTTTC AGTTGGAATT GAAGCTCAAA 
AAAAAAGGCT TTTTAGCTTT TGAGATTAAT CCGGCACTCG ACTATCTTAT GGGGATAGGT 
TTGCTTGATG ATGAGCGGTT TGCCAGGGCT TGGCTTAATA CCAGAGTTAT AAGTAAAAAA 
GAAGGCCGTA ATAGATTGGC CTCCGAGCTT GCTCAAAGAG GAGTAAGCTT TAAAATTGTG 
GAAGATGTGC TTAATGAGTT TTTTTCGGAG CATTCGGAAG AAGATATTTG CCGAGAAGCT 
TTGGAAAAAC AACTGATAAA TAGGGTGGAT AAGTCTCGGT TAATGCGTAA AATGTATAGA 
CTGGGCTTTT CCGTTAGCAC TGTGAATATA TGTTTGGAGG GACTTGAAAA CATTACCGAC 
TCTTTTTGA
 
Protein sequence
MQDEDSSSAN VNPFSIADIC STSSDLVKII NSEGVSFVTR PDYFDEDDFD GLVGECGCPI 
SDESLEALLN AVRIYEAECT ASAYLYRAEH SRFQLELKLK KKGFLAFEIN PALDYLMGIG 
LLDDERFARA WLNTRVISKK EGRNRLASEL AQRGVSFKIV EDVLNEFFSE HSEEDICREA 
LEKQLINRVD KSRLMRKMYR LGFSVSTVNI CLEGLENITD SF