Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0838 |
Symbol | nqrA |
ID | 2739615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 857199 |
End bp | 858641 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637159711 |
Product | Na(+)-translocating NADH-quinone reductase, A subunit |
Protein accession | NP_971448 |
Protein GI | 42526350 |
COG category | [C] Energy production and conversion |
COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0144455 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTATAA AATCATTTAA AGGCGGAGTG CATCCGCCCG AGCGAAAGGC GGTCTCACCT AGCGACAGCG TCATTAGGGT ATTACCGTCA AATAAATCAG TTTGGATTCC TATTACGCAG GGAGGCATGC CTAATACACC TCTTGTAAGC GTAGGGGATT TGGTTGCCAG AGGGCAAAAG ATAGCCGAAA CCGATAAATT TATGTCGGCT CCCGTCCATT CCTCCGTTTC AGGAAAGGTA AAAAAGATAG AACCTCATCT TGTAACCGGA AATACGGAAA ATCTTTGTTT TTTAATCGAA ATAGATGAAG AAAATAGGGA AGAATTTATG CCTCCCCTTG ACCCTTTTAC ATGCACAAAG GAAGAAGCTC TTAAAAGAGT ACGGGATGCA GGCATTACGG GCATGGGAGG AGCATCATTT CCTACTCATG TAAAATTAAG CCCTCCTCCC GATGCAAAAA TCGAGTATGT AATAGCAAAC GGAGCGGAAT GTGAACCCTA TCTTTGCACG GATGCCGCTA CGATTTTTAG CGATTCGGAT AGCATTGTAG ACGGACTTGC AATAACTATG CGTATAGTAG GCGCAAAACA AGGAATTATA GCCCTTGAAG ACAATAAAAA AGATTTGGTT CCGGTTTTGG AAAAGGCTAT TTCAAAAATT AAAGCAAATC CGATTGCCGC AGGTGCTTAC GATATAAGCG TTCAACTTTG TAAAACAAAA TATCCGCAGG GCGGAGAAAA AACTCTTACG GATGCAGTCG TAAACAGGGA AATCCCTTCA GGAGGCCTTC CCTTCCAAAT AGGCTGCGTT ATCCAAAACG TAGGAACCTT AAAAGCGATA TCCGAAGCCT TCCGTTTGGG TAAACCCCTT ATCGACAGAG CCTTAACCAT AGGCGGCGGG GCCTGCGAAA AGCCCTTAAA CGTAATAGCC CCTATAGGAA CCTGCGTCGG GGACCTTATT CCAAGCGTAG TTTCCCTTAA ACCGGGAGTC GTAAAAATAA TCTCAGGCGG CCCGATGATG GGCTTTGCCA TGAAAAATGC AGACTTCCCT ATTCAAAAAA ATACCTCAGG TGTACTTTTT TTAACAAAGG AAGAAATTTC CTTAGAAGAA GAAAGCCCAT GTATAGGTTG CGGTAAGTGT ATTGACGTAT GCAGCTGTCA CCTTTCTCCC GTTTTAATCG TTAGAGCATT AAATGCCGGA AATACCGAAG AAGCTATCCG CTGCGGTCTT TTAGACTGTG TAGAATGCGG AACCTGCGCT TATACCTGCC CTGCCCGCAT TAAACTCGTT CAAAGAGTTA AGATTGGTAA GCAGATAGCA AGGGAAGAAA AGCAAAAAAG AGATGCCAAA GCTGCAGCGA AGGCCGCAGC AGCAGAAAAA AAAGCAGCTG AAGCTCAAAA ACAAGAGCCT GAGGCTAAAA AAACCGAAGA AGGAGGCAAA TAA
|
Protein sequence | MGIKSFKGGV HPPERKAVSP SDSVIRVLPS NKSVWIPITQ GGMPNTPLVS VGDLVARGQK IAETDKFMSA PVHSSVSGKV KKIEPHLVTG NTENLCFLIE IDEENREEFM PPLDPFTCTK EEALKRVRDA GITGMGGASF PTHVKLSPPP DAKIEYVIAN GAECEPYLCT DAATIFSDSD SIVDGLAITM RIVGAKQGII ALEDNKKDLV PVLEKAISKI KANPIAAGAY DISVQLCKTK YPQGGEKTLT DAVVNREIPS GGLPFQIGCV IQNVGTLKAI SEAFRLGKPL IDRALTIGGG ACEKPLNVIA PIGTCVGDLI PSVVSLKPGV VKIISGGPMM GFAMKNADFP IQKNTSGVLF LTKEEISLEE ESPCIGCGKC IDVCSCHLSP VLIVRALNAG NTEEAIRCGL LDCVECGTCA YTCPARIKLV QRVKIGKQIA REEKQKRDAK AAAKAAAAEK KAAEAQKQEP EAKKTEEGGK
|
| |