Gene TDE0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0838 
SymbolnqrA 
ID2739615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp857199 
End bp858641 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content44% 
IMG OID637159711 
ProductNa(+)-translocating NADH-quinone reductase, A subunit 
Protein accessionNP_971448 
Protein GI42526350 
COG category[C] Energy production and conversion 
COG ID[COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 
TIGRFAM ID[TIGR01945] electron transport complex, RnfABCDGE type, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0144455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTATAA AATCATTTAA AGGCGGAGTG CATCCGCCCG AGCGAAAGGC GGTCTCACCT 
AGCGACAGCG TCATTAGGGT ATTACCGTCA AATAAATCAG TTTGGATTCC TATTACGCAG
GGAGGCATGC CTAATACACC TCTTGTAAGC GTAGGGGATT TGGTTGCCAG AGGGCAAAAG
ATAGCCGAAA CCGATAAATT TATGTCGGCT CCCGTCCATT CCTCCGTTTC AGGAAAGGTA
AAAAAGATAG AACCTCATCT TGTAACCGGA AATACGGAAA ATCTTTGTTT TTTAATCGAA
ATAGATGAAG AAAATAGGGA AGAATTTATG CCTCCCCTTG ACCCTTTTAC ATGCACAAAG
GAAGAAGCTC TTAAAAGAGT ACGGGATGCA GGCATTACGG GCATGGGAGG AGCATCATTT
CCTACTCATG TAAAATTAAG CCCTCCTCCC GATGCAAAAA TCGAGTATGT AATAGCAAAC
GGAGCGGAAT GTGAACCCTA TCTTTGCACG GATGCCGCTA CGATTTTTAG CGATTCGGAT
AGCATTGTAG ACGGACTTGC AATAACTATG CGTATAGTAG GCGCAAAACA AGGAATTATA
GCCCTTGAAG ACAATAAAAA AGATTTGGTT CCGGTTTTGG AAAAGGCTAT TTCAAAAATT
AAAGCAAATC CGATTGCCGC AGGTGCTTAC GATATAAGCG TTCAACTTTG TAAAACAAAA
TATCCGCAGG GCGGAGAAAA AACTCTTACG GATGCAGTCG TAAACAGGGA AATCCCTTCA
GGAGGCCTTC CCTTCCAAAT AGGCTGCGTT ATCCAAAACG TAGGAACCTT AAAAGCGATA
TCCGAAGCCT TCCGTTTGGG TAAACCCCTT ATCGACAGAG CCTTAACCAT AGGCGGCGGG
GCCTGCGAAA AGCCCTTAAA CGTAATAGCC CCTATAGGAA CCTGCGTCGG GGACCTTATT
CCAAGCGTAG TTTCCCTTAA ACCGGGAGTC GTAAAAATAA TCTCAGGCGG CCCGATGATG
GGCTTTGCCA TGAAAAATGC AGACTTCCCT ATTCAAAAAA ATACCTCAGG TGTACTTTTT
TTAACAAAGG AAGAAATTTC CTTAGAAGAA GAAAGCCCAT GTATAGGTTG CGGTAAGTGT
ATTGACGTAT GCAGCTGTCA CCTTTCTCCC GTTTTAATCG TTAGAGCATT AAATGCCGGA
AATACCGAAG AAGCTATCCG CTGCGGTCTT TTAGACTGTG TAGAATGCGG AACCTGCGCT
TATACCTGCC CTGCCCGCAT TAAACTCGTT CAAAGAGTTA AGATTGGTAA GCAGATAGCA
AGGGAAGAAA AGCAAAAAAG AGATGCCAAA GCTGCAGCGA AGGCCGCAGC AGCAGAAAAA
AAAGCAGCTG AAGCTCAAAA ACAAGAGCCT GAGGCTAAAA AAACCGAAGA AGGAGGCAAA
TAA
 
Protein sequence
MGIKSFKGGV HPPERKAVSP SDSVIRVLPS NKSVWIPITQ GGMPNTPLVS VGDLVARGQK 
IAETDKFMSA PVHSSVSGKV KKIEPHLVTG NTENLCFLIE IDEENREEFM PPLDPFTCTK
EEALKRVRDA GITGMGGASF PTHVKLSPPP DAKIEYVIAN GAECEPYLCT DAATIFSDSD
SIVDGLAITM RIVGAKQGII ALEDNKKDLV PVLEKAISKI KANPIAAGAY DISVQLCKTK
YPQGGEKTLT DAVVNREIPS GGLPFQIGCV IQNVGTLKAI SEAFRLGKPL IDRALTIGGG
ACEKPLNVIA PIGTCVGDLI PSVVSLKPGV VKIISGGPMM GFAMKNADFP IQKNTSGVLF
LTKEEISLEE ESPCIGCGKC IDVCSCHLSP VLIVRALNAG NTEEAIRCGL LDCVECGTCA
YTCPARIKLV QRVKIGKQIA REEKQKRDAK AAAKAAAAEK KAAEAQKQEP EAKKTEEGGK