Gene TDE0828 details

Gene Information

• Locus tag: TDE0828
• Symbol: gidA
• ID: 2739512
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 848373
• End bp: 850259
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637159701
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: NP_971438
• Protein GI: 42526340
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0259536
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAGAT TTTCCGATTA TGATGTAATA GTCGTAGGAG CAGGACATGC AGGCATTGAA 
GCCGCCCTAG CTTCCGCCAG AATGGGGGAA GCTGTCCTCT TGATTACCCA GACTCTCGAC 
AGCGCGGGCC GCCTTTCATG CAATCCTTCG ATAGGCGGCA TCTCCAAGGG AAACATAGTC 
CGCGAGATAG ATGCCCTCGG CGGCGAAATG GGGAAGCTCG CAGATGCCTC GATGATTCAG 
TACAGGCTCT TAAACAAGAG CCGAGGGCCG GCAGTTCAGG CGCCAAGGGT TCAAGCCGAC 
AAATTCCTTT ATTCTCAACT GGCAAAGCAC GCAATAGAGC TTGAAAAGAA CCTCCATGTT 
TTTCAGGACA CCGTTATCGA TATAGTTTCT TCAAACACAA ATGAGTCGGG CTATGTAGAA 
AAGGGAAGTG TTCAATATGT AAAAACGGAA AGAGGAAGAG AATTTTCGGC TAAGGCAGTA 
GTCCTTGCAA CCGGTACCTT TATGGAAGGC AAGATTTACA TAGGCGAATA CGAATCTCCC 
GACGGAAGGC TTGGCGAAAG AGCTGCCATA GGTCTCGGCC CCGCCCTTGC AAAGAAAGGC 
TTTACCGTGG GCAGGCTTAA AACTGGAACG CCCATGCGTA TCCTCCGCCG CTCCTTTGAT 
TCTTCCCTTA CCGAAGAGCA GGAAGCCGAT GAGATTATGC GGCCATTTTC TTTTTCAAAT 
GCGGAAATAC ACAGGCCTTA TGCAAAATGC TATATAACTC ATACCAATCA GGAAACCCAC 
GATATAATAA GAGAGAACCT TCACAGGGCA GCCCTTTTTT CGGGCAAAAT CACAGGGACG 
GGAGCCCGCT ACTGTCCCTC CATCGAAGAT AAGATTAAAA AATTCCCCGA AAGGGACCGC 
CACCATGTCT ACATAGAACC GGAAGGCTTA AACACGGAAG AGCTTTATAT AAACGGGCTT 
TCTTCCTCGC TTCCAGAAGA CGTGCAGGAC AGAATGATAA GAACCATCCC CTGCTTTAAG 
GATGTAATAA TTACCCGTCC CGCCTATGCC GTAGACTATG CCTATGTTTC GCCGATCCAG 
CTTTCATCGG ATCTGCAGAC ACGGCGGATT GAAGGCCTCT TTTTGGCAGG ACAGATAAAC 
GGAACTTCAG GCTATGAAGA AGCCGGAGGC CAAGGCATAA TAGCCGGTAT AAACGCAGCC 
CTTTTTTCGC GCTCTCTAAA ATTTAAAGAC GAAAAATATG TTCCATTTGT GCTAAAGAGG 
GATGAGGCCT ACATAGGCGT TATGATAGAC GACCTTGTAA CTCAGGGAGT GGATGAGCCT 
TACCGAATGT TTACGGCCCG TGCAGAGTAC AGACTGAACC TGAGGCATGA CACGGCCGAT 
GAAAGGCTTA CGGAAAGGGC TTATCAGATA GGCCTTCAAA CCAAGGAGGC TTCAAACCGC 
CTAAAGGAAA AACTTTTAAC CAGAGAAAAA ATAATATCGC TATGGAAGGA TATAAAGATT 
ACGAGGGACC TCATTGCAAA AAATCCCGAA CTTAAAAACC ATATCGGGAA GAGTCTTGCC 
GATGCCCTCC ATGACCCTCA GGTTTCCCTT GAATGTATAT GTGCAATAGA TGAAAATTCT 
AAGGATTACA GTGCAGAACT TTTAGAATCG GCCGAGCTTG AAATAAGGTA TGAACACTAC 
ATAGCCGTTC AAAACAGGAA GATAGCCAAG GTGAAACGTA TGGAAAACAC TAAAATCCCT 
GCTGACTTTG ACTATGATGC CGTTTCGGGT CTCTCTACCG AATCGCGAAC CCGCCTAAAA 
GAAGTACGCC CCGAAACCAT AGGTCAAGCA AGCCGAATTA GGGGGATTAG GCCTTCGGAT 
ATTATGTTAC TATCCATACT CTTATAA 

 

Protein sequence

MYRFSDYDVI VVGAGHAGIE AALASARMGE AVLLITQTLD SAGRLSCNPS IGGISKGNIV 
REIDALGGEM GKLADASMIQ YRLLNKSRGP AVQAPRVQAD KFLYSQLAKH AIELEKNLHV 
FQDTVIDIVS SNTNESGYVE KGSVQYVKTE RGREFSAKAV VLATGTFMEG KIYIGEYESP 
DGRLGERAAI GLGPALAKKG FTVGRLKTGT PMRILRRSFD SSLTEEQEAD EIMRPFSFSN 
AEIHRPYAKC YITHTNQETH DIIRENLHRA ALFSGKITGT GARYCPSIED KIKKFPERDR 
HHVYIEPEGL NTEELYINGL SSSLPEDVQD RMIRTIPCFK DVIITRPAYA VDYAYVSPIQ 
LSSDLQTRRI EGLFLAGQIN GTSGYEEAGG QGIIAGINAA LFSRSLKFKD EKYVPFVLKR 
DEAYIGVMID DLVTQGVDEP YRMFTARAEY RLNLRHDTAD ERLTERAYQI GLQTKEASNR 
LKEKLLTREK IISLWKDIKI TRDLIAKNPE LKNHIGKSLA DALHDPQVSL ECICAIDENS 
KDYSAELLES AELEIRYEHY IAVQNRKIAK VKRMENTKIP ADFDYDAVSG LSTESRTRLK 
EVRPETIGQA SRIRGIRPSD IMLLSILL