Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0819 |
Symbol | |
ID | 2739561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 841739 |
End bp | 843475 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637159692 |
Product | ABC transporter, ATP-binding/permease protein |
Protein accession | NP_971429 |
Protein GI | 42526331 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.608136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACACAT ACAAAAGATT ATTGAAATAT ACGCCGGAAA AAAAACACTG CGTGTATATT TCCATTATTT GCTCCGCTTT AGGCGTTGCT TGCCAAATGG GAGCATTTTG GTACTTATGG AAGTTTTTGT ACGCCTTTTT GGTTACAAAA AGCGTTACGG ACGGATCGTT TTATGCAACG GTGATTGTCG CTCTTATGCT CGGATACTCG GTTGTGTATT TCGCGTCCCT ATGGGCATCG CATGTGCTGG GTTTCCGTCT TGAATCGAAT TTACGAAAGG AGGCAATCAA ACATTTGATG AATGCATCCT TTGCTTTTTT CGATGTAAAC AATTCGGGAA AGATTCGCAA AATCATTGAC GACAACGCGC AGGAAACGCA CATGATTGTC GCTCACCTTA TTCCCGACAA TGTAGCCGCC CTTCTTACTC CGATTTTAAT GTTCGTCATT GTTTTTATGG TAGACATAAA ACTAGGTATC TTGCTTAGCA TTATCGCGAT AATCGGCGGT GTGCAGATGA TGTTTATGAT GGGCAATAAG AACTTTATGC AGAAATACAT GGCAGCCTTG GAAAGGATGA ACAGCGAAGC GGTGGAGTAC GTACGCGGTA TGCAGGTTGT AAAAATCTTT AATAGCACGG TAGAATCCTT CAAATCGTTT TACACGGCAA TTATCGACTA TTCCGATTTG GCATACAAGT ACACGCTCAG CTGCCGAAGC CCTTATGTTA TGTTTCAAGT GCTGTTCAAT TTGTTTGCCG CCTTTACAAT CCCTGCAGCA ATTTATTATA TGAATAAGGG TGCGGACGGA AATCTCATCA TCGCAAAAAT AGTATTTTAT GTATGTTTTA CAGGAATTCT CTTTGCTTCT TTTATGCGTG TTATGTATGT CGGCATGTAC AACTTTCAGG CAAAGAGCGT TGTAGACAAA CTGGAAAATC TTTTTACCGA AATGAGCAAG GATAACATAA CCCACGGAAC TGAAGAAAAA TTCGACAACT TCGGTATTGA ATTTAAAAAT GTTTCGTTCG GTTACAATGA AGAAAAGATT TTGAAAAACG TGAGCTTTAA ACTTGAACCG AATAAAACCT ATGCACTCGT AGGATCATCG GGCGGAGGAA AGAGTACAAT AGCAAAACTT ATCTCAGGTT TTTATAGAAT AAATGAAGGC GAAATTCTAA TCGGCGGAAA AGATATTGCC TCGTACTCCA AAAACGCCTT AATGAAAAAC ATAGCTTTTG TTTTTCAAAC ATCTAAACTT TTTAAAACAA GTATTTTTGA AAACGTTAAA ATGGGAAATA AAAACGCAAG CGACGAAGAT GTCATGAACG CACTCCGCCT TGCCAGATGT GAAGACATCT TGGATAAGTT TAAAGATAGA GAACATACTT TAATCGGTTC TAAAGGCGTA CACTTATCCG GCGGAGAAAT TCAACGTGTT GCAATCGCCA GAGCCATTTT AAAAAATGCC GACATCATAA TCTTGGACGA AGCTTCAGCC GCCGCCGACC CCGAAAACGA ATACGAAATT CAGCAGGCCT TTTCCAATCT GATGAAAAAC AAAACGGTAA TCATGATTGC TCACCGCTTA AGCTCGATTA AAAATGTCGA TGAAATTTTG GTTGTCGAAG ACGGAAACAT AATCGAACGC GGCAGCGACA AAGAGCTTAT GGAAAAAGAC GGAAAGTACA GCAAGCTGCA GAAACTGTAT TCGCATGCGA ACGAGTGGAG AGTGTAA
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Protein sequence | MDTYKRLLKY TPEKKHCVYI SIICSALGVA CQMGAFWYLW KFLYAFLVTK SVTDGSFYAT VIVALMLGYS VVYFASLWAS HVLGFRLESN LRKEAIKHLM NASFAFFDVN NSGKIRKIID DNAQETHMIV AHLIPDNVAA LLTPILMFVI VFMVDIKLGI LLSIIAIIGG VQMMFMMGNK NFMQKYMAAL ERMNSEAVEY VRGMQVVKIF NSTVESFKSF YTAIIDYSDL AYKYTLSCRS PYVMFQVLFN LFAAFTIPAA IYYMNKGADG NLIIAKIVFY VCFTGILFAS FMRVMYVGMY NFQAKSVVDK LENLFTEMSK DNITHGTEEK FDNFGIEFKN VSFGYNEEKI LKNVSFKLEP NKTYALVGSS GGGKSTIAKL ISGFYRINEG EILIGGKDIA SYSKNALMKN IAFVFQTSKL FKTSIFENVK MGNKNASDED VMNALRLARC EDILDKFKDR EHTLIGSKGV HLSGGEIQRV AIARAILKNA DIIILDEASA AADPENEYEI QQAFSNLMKN KTVIMIAHRL SSIKNVDEIL VVEDGNIIER GSDKELMEKD GKYSKLQKLY SHANEWRV
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