| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0818 |
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| Symbol | |
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| ID | 2739560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 840016 |
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| End bp | 841737 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637159691 |
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| Product | ABC transporter, ATP-binding/permease protein |
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| Protein accession | NP_971428 |
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| Protein GI | 42526330 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00589129 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AATTACAAAA ATTATTTGCA GTTACCGAAC ATGGTGCTCG GGATTTGGTT
ACAGCATCGG TATGGTCGGT GTTTTCTAAC ATCGCCTATA TCCTGCCGAT GTTTTTGATT
ATGTTTTTTT TGCAGGGCTA TTTTGAAGGC TCGCTTAAAA CGGCTTACTT TTATACAGGC
CTTATTGCGG CCATTGCGGT GGTAATGTAC ATTCTTTTAC ATGTAAATTA CAACACACTG
TACACGGTAA CTTTTAAAGA ATGTAAGGAG CTGCGAATCG AAATTGCAAA CCGCTTAAAA
GCATTGCCGC TTGCATATTT TTCCAAACAC GATATTTCAG ATTTGTCGCA AGCCGTTATG
GCGGATGTCG CAACTCTTGA ACACGCATTG AGCCACGCCA TTCCGCAAAC AATAGGACTG
GTAATTTATC TTTTAATTAT CGGCACAATG ATGATTATAG CCCATCCGGC CTTGGGGCTT
TGTGTCTTTG CACCGATAGT AGTGAGCTTT ATCCTGCTTA TTTTATCAAA GAAGATTCAA
GTGCGGGAAA CAACAAGAGA CTTCCACAAA CAAAGACAGC GTTCCGAATT TTTCCAAGAA
GCGATTGAGC TTCAACAGGA AATTAAAAGC TACGGCCGCA CGGATACGGT TGCAGAAAAA
TTAAACCGCA ATGTCGATGA AGCTGAAAAA CTTCATCTAT CGGTTGAAGC CCATCAAGCG
ATTCCGCTCA ATATCGCACT TGCAGCACTA AAGTTTTCTG TCGGGATAAC GGTCTTTTTC
GGTTTAAAAA TGTACTTAGC CGGAACCGCC TCTCTTCTGT ACTTTATCGG CTATGTCATT
GCCGCCTCGC GCATTATCGA TGCAGTTGCA GCTGTCGAAG CAAACCTTGC AGAGATTATG
TACATTGATT CACGCGTTAA GCGTATCAAT GAGCTGCGAG AAACCGAAGT ACAGGAAGGC
TCTCCCGCAA ACTTACAAAA ATACGGCATC GAATTTAAAG ATGTTGAGTT TTCTTATAAT
GACGGGCAAA AAATTATCGA CGGCATTTCT TTTACGGCCG AACAAAATCA GGTTACAGCC
CTTGTCGGTC CTTCGGGCTG CGGAAAGACA ACCGTACTCC GTTTGGCCTC TCGTCTCTAT
GATTACAACA AGGGGCAGAT TCTTATCGAC GGCAAGGACA TTGCAAAAAT CGACACGGAC
AGTCTTTTTG AAAAGATTTC GATTGTGTTC CAAGACGTAG GTTTATTCAA CACATCGATT
ATGGAAAATA TCCGCGTCGG AAATAAAAAT GCTACTGATG AAGAAGTAAA GGAAGCCGCC
CGTCTTGCAA ACTGTACCGA GTTTATCGAA GCCCTGCCCG AAAGCTGGAA TACCTTTGTC
GGAGAAAACG GCAGCCGTCT TTCAGGCGGA GAACGCCAGC GTCTTTCGAT TGCCCGCGCC
TTCTTAAAAA ACGCCCCCAT CATTATCTTG GACGAAATCA GTGCGTCGCT TGATGTCGAA
AACGAAATGA AAATTCAGGA AAGCTTAAAT AAACTTATCA AGGATAAAAC AGTTATCATC
ATTTCGCACA GATTAAAGTC CATCGAAAAT GCAGATAAAA TTATTGTCAT GAACGAAGGC
AAAATAGAAG CGGAAGGCAA ACACGCGGAT CTTTTGCAAA AATCCGAATT GTACAAAAAC
ATGATTGATA AGTCTACAGC CACGGAAAAA TGGGTGTATT AG
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| Protein sequence | MKKKLQKLFA VTEHGARDLV TASVWSVFSN IAYILPMFLI MFFLQGYFEG SLKTAYFYTG
LIAAIAVVMY ILLHVNYNTL YTVTFKECKE LRIEIANRLK ALPLAYFSKH DISDLSQAVM
ADVATLEHAL SHAIPQTIGL VIYLLIIGTM MIIAHPALGL CVFAPIVVSF ILLILSKKIQ
VRETTRDFHK QRQRSEFFQE AIELQQEIKS YGRTDTVAEK LNRNVDEAEK LHLSVEAHQA
IPLNIALAAL KFSVGITVFF GLKMYLAGTA SLLYFIGYVI AASRIIDAVA AVEANLAEIM
YIDSRVKRIN ELRETEVQEG SPANLQKYGI EFKDVEFSYN DGQKIIDGIS FTAEQNQVTA
LVGPSGCGKT TVLRLASRLY DYNKGQILID GKDIAKIDTD SLFEKISIVF QDVGLFNTSI
MENIRVGNKN ATDEEVKEAA RLANCTEFIE ALPESWNTFV GENGSRLSGG ERQRLSIARA
FLKNAPIIIL DEISASLDVE NEMKIQESLN KLIKDKTVII ISHRLKSIEN ADKIIVMNEG
KIEAEGKHAD LLQKSELYKN MIDKSTATEK WVY
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