| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0789 |
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| Symbol | rpsM |
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| ID | 2740667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 816702 |
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| End bp | 817067 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637159662 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | NP_971399 |
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| Protein GI | 42526301 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000154932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCGTA TTGCGGGAGT TGACCTCCCT AACAAACATG TTAATGTTTC ATTAACATAC
ATTTATGGAA TTTCGACTTC ATCGGCAAAC AAAATTTGTG AAGCTACAAA GGTTGATCCG
ATGAAAAAAA TGAATGATTT GGATGAAGCC GAGTTAGCTG CAATCCGTGA AGTGATTGAC
AGAGAGTACA AGGTAGAAGG CCGCCTTCGA ACCGAAGTGG CTTTAAATAT CAAACGTCTT
CAGGATATCG GATGCTACCG CGGTCAAAGA CACAGAAAGG GTCTCCCGGT ACGCGGACAG
AGAACTAGGA CAAATGCCAG AACACGCAAG GGTAAGAAGA AGACCGTTGC CGGTAAGAAG
AAATAA
|
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| Protein sequence | MARIAGVDLP NKHVNVSLTY IYGISTSSAN KICEATKVDP MKKMNDLDEA ELAAIREVID
REYKVEGRLR TEVALNIKRL QDIGCYRGQR HRKGLPVRGQ RTRTNARTRK GKKKTVAGKK
K
|
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