Gene TDE0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0788 
SymbolrpmJ 
ID2740666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp816572 
End bp816685 
Gene Length114 bp 
Protein Length37 aa 
Translation table11 
GC content33% 
IMG OID637159661 
Product50S ribosomal protein L36 
Protein accessionNP_971398 
Protein GI42526300 
COG category 
COG ID 
TIGRFAM ID[TIGR01022] ribosomal protein L36, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000298686 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTA GAACAAGTGT AAAACCTATT TGTGATAAAT GTAAGGTTAT TAAGCGCAAC 
GGAATAGTAC GGATAATCTG TACAAATCCT AAGCATAAAC AGAGACAAGG TTAA
 
Protein sequence
MKVRTSVKPI CDKCKVIKRN GIVRIICTNP KHKQRQG