Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0781 |
Symbol | rpsH |
ID | 2740659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 812701 |
End bp | 813099 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637159654 |
Product | 30S ribosomal protein S8 |
Protein accession | NP_971391 |
Protein GI | 42526293 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0096] Ribosomal protein S8 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00525969 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGTTT CAGATCCAAT AGCAGATATG CTTACTAAAA TTAGAAATGC TGCTTCAGCC GGTCACGAAT CGGTTGATGT TCCTTCTTCA AAAATGAAGT GGGAAATTAT CAGTATTCTT AAATCGGAAG GGTATATTAA AAACTTTAAA AAAATGACCC AGGAAGGTGC CGGCAATATC CGCGTATTCT TAAAATACGA TGATAAAGAA TCTTCGGTTA TTCACGGAAT CGAAAGAGTT TCCACACCCG GCCGCCGAGT ATATTTAGGT TATAAGAGCT TACCGAGAGT TTTTAACGGC TACGGTACTC TTATTGTATC GACTTCAAAG GGTATCATTA CCGGAAAAGC AGCCGGCGAA AGCCAAGTAG GCGGCGAGCT TATTTGCAAG GTTTGGTAG
|
Protein sequence | MSVSDPIADM LTKIRNAASA GHESVDVPSS KMKWEIISIL KSEGYIKNFK KMTQEGAGNI RVFLKYDDKE SSVIHGIERV STPGRRVYLG YKSLPRVFNG YGTLIVSTSK GIITGKAAGE SQVGGELICK VW
|
| |