Gene TDE0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0781 
SymbolrpsH 
ID2740659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp812701 
End bp813099 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content41% 
IMG OID637159654 
Product30S ribosomal protein S8 
Protein accessionNP_971391 
Protein GI42526293 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00525969 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTTT CAGATCCAAT AGCAGATATG CTTACTAAAA TTAGAAATGC TGCTTCAGCC 
GGTCACGAAT CGGTTGATGT TCCTTCTTCA AAAATGAAGT GGGAAATTAT CAGTATTCTT
AAATCGGAAG GGTATATTAA AAACTTTAAA AAAATGACCC AGGAAGGTGC CGGCAATATC
CGCGTATTCT TAAAATACGA TGATAAAGAA TCTTCGGTTA TTCACGGAAT CGAAAGAGTT
TCCACACCCG GCCGCCGAGT ATATTTAGGT TATAAGAGCT TACCGAGAGT TTTTAACGGC
TACGGTACTC TTATTGTATC GACTTCAAAG GGTATCATTA CCGGAAAAGC AGCCGGCGAA
AGCCAAGTAG GCGGCGAGCT TATTTGCAAG GTTTGGTAG
 
Protein sequence
MSVSDPIADM LTKIRNAASA GHESVDVPSS KMKWEIISIL KSEGYIKNFK KMTQEGAGNI 
RVFLKYDDKE SSVIHGIERV STPGRRVYLG YKSLPRVFNG YGTLIVSTSK GIITGKAAGE
SQVGGELICK VW