Gene TDE0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0778 
SymbolrplX 
ID2740656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp811627 
End bp811941 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content43% 
IMG OID637159651 
Product50S ribosomal protein L24 
Protein accessionNP_971388 
Protein GI42526290 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0177963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAA AGATGAAGAT TCGCCGCAAT GATAGTGTTG AAATTATTGC AGGCAAGGAA 
AGGGGCAAGC GGGGCGAAGT CGTAAAGGTC TTGCAGGAAG ATAACAAGGT TATCGTCGGC
GGACTTAATA TGATAAAGAA AGCCATGCGC AAAAGAAGCC AGCAGGATCA GGGCGGAATT
GTAGAAATTG AAGCTCCGAT ATCTGCATCC AATGTTATGG TTATATGCAA AAAATGCGGA
AAAACCCGTA TTGCATACGA AATAAAGGAC GGCAAAAAAA CAAGAATTTG CCGTAAGTGT
GGAGAAGCGT TATAA
 
Protein sequence
MAGKMKIRRN DSVEIIAGKE RGKRGEVVKV LQEDNKVIVG GLNMIKKAMR KRSQQDQGGI 
VEIEAPISAS NVMVICKKCG KTRIAYEIKD GKKTRICRKC GEAL