Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0778 |
Symbol | rplX |
ID | 2740656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 811627 |
End bp | 811941 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637159651 |
Product | 50S ribosomal protein L24 |
Protein accession | NP_971388 |
Protein GI | 42526290 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0198] Ribosomal protein L24 |
TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0177963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGAA AGATGAAGAT TCGCCGCAAT GATAGTGTTG AAATTATTGC AGGCAAGGAA AGGGGCAAGC GGGGCGAAGT CGTAAAGGTC TTGCAGGAAG ATAACAAGGT TATCGTCGGC GGACTTAATA TGATAAAGAA AGCCATGCGC AAAAGAAGCC AGCAGGATCA GGGCGGAATT GTAGAAATTG AAGCTCCGAT ATCTGCATCC AATGTTATGG TTATATGCAA AAAATGCGGA AAAACCCGTA TTGCATACGA AATAAAGGAC GGCAAAAAAA CAAGAATTTG CCGTAAGTGT GGAGAAGCGT TATAA
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Protein sequence | MAGKMKIRRN DSVEIIAGKE RGKRGEVVKV LQEDNKVIVG GLNMIKKAMR KRSQQDQGGI VEIEAPISAS NVMVICKKCG KTRIAYEIKD GKKTRICRKC GEAL
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