Gene TDE0768 details

Gene Information

• Locus tag: TDE0768
• Symbol: rplD
• ID: 2740308
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 807136
• End bp: 807771
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637159641
• Product: 50S ribosomal protein L4
• Protein accession: NP_971378
• Protein GI: 42526280
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000241518
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGA AAGTCTATTC AGTCGATGGT AAAGAATTGA GGACAATTAA TCTTGATGAC 
AAGGTGTTCG GTCTTCCCGT AAATGATGAT GTTATTTACT ACGCCATCAA TAATGAACTA 
GCCAATAAAC GAGTCGGAAC GGCTTGTACA AAGGGCAGAG CTGAGGTTCA CGGTTCAAAT 
TCCAAGCCTT ACAGCCAAAA AGGTACAGGA CGTGCACGAC GCGGTGATAA AAAATCTCCT 
CTTTTAGTCG GAGGAGGAAC TATTTTCGGA CCTAAACCGA GAGATTTCAG CTATTCTATG 
CCTAAAAAAG CAAAAAGATT GGCAATGAAG TCAATTTTGA GTCTTAAAGC TCAAAACGAC 
AGGTTAGTGG TTGTAGAAGA TTTTACGGTA GAAAGCGGAA AAACCCGCGA CCTTGTAAAG 
ATTTTAGATA ACTTTGCAAA GGGAGAGCGT GCTGTTATTA TCCTAAAGGA CGATGATTCT 
TTGGTAAAAA GAGCAGGACG CAATATTCCG CATCTTTCAT TCTTGGCATA TAACCGCCTT 
CGAGCTCACG ATTTATTCTA CGGCCGAAAA GTTATCATGC TTGAATCTGC CGCAAAAAAT 
CTTTCTGAAT TTTACGGATG TAAGGAGGCC GAATAA 

 

Protein sequence

MEKKVYSVDG KELRTINLDD KVFGLPVNDD VIYYAINNEL ANKRVGTACT KGRAEVHGSN 
SKPYSQKGTG RARRGDKKSP LLVGGGTIFG PKPRDFSYSM PKKAKRLAMK SILSLKAQND 
RLVVVEDFTV ESGKTRDLVK ILDNFAKGER AVIILKDDDS LVKRAGRNIP HLSFLAYNRL 
RAHDLFYGRK VIMLESAAKN LSEFYGCKEA E