Gene TDE0767 details

Gene Information

• Locus tag: TDE0767
• Symbol: rplC
• ID: 2740307
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 806495
• End bp: 807121
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637159640
• Product: 50S ribosomal protein L3
• Protein accession: NP_971377
• Protein GI: 42526279
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00229919
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGGAC TGATTGGAAA AAAAATCGGC ATGACCCAAA TCTTCAATGA AGTCGGCCAT 
CTTATGCCGG TTACGGTTAT TCAGGTAGAA CCCAATACCG TTGTTGCACT AAAGGACAAG 
GAAAAGTTCG GATACTCTTC AGTAGTGCTC GGTTTGGGTG AACTCAAAGA AAAGCACACC 
AGCAAACCCT ATGCAGGACA GTTCAGCGGA GATATCAAGC CTTTAAAACT TTTAAAGGAA 
TTCCGTGATT TTGACAAAGA AGTCGCAGTA GGTGATAAGC TCGGTGTAGA GGCTTTTGAA 
AAAGTTTCGT ATTTAGACAT TACGGCAATT TCAAAAGGTA AAGGTTTTCA GGGTGTTATG 
AAGCGATGGG GCTATGGAGG CGGTAGAGCA AGCCATGGTT CTAAGTTCCA CCGTGAAGCA 
GGTTCGACGG GACACTGTAC AACTCCGGGT CGGTCTTTTA AAAATACGAC AATGCCCGGA 
AGGATGGGTT TTGACAAGGT TACCGTTCAA AATTTGCAAA TCGTAAAGAT TGATCCTGAA 
TTGGGTGTTA TAATGGTTCG CGGTTCTGTT CCGGGTAAAA AGGATGCAAC TGTATTCTTA 
AAATCCGCAG TAAAGCGGGC TAAATAA 

 

Protein sequence

MIGLIGKKIG MTQIFNEVGH LMPVTVIQVE PNTVVALKDK EKFGYSSVVL GLGELKEKHT 
SKPYAGQFSG DIKPLKLLKE FRDFDKEVAV GDKLGVEAFE KVSYLDITAI SKGKGFQGVM 
KRWGYGGGRA SHGSKFHREA GSTGHCTTPG RSFKNTTMPG RMGFDKVTVQ NLQIVKIDPE 
LGVIMVRGSV PGKKDATVFL KSAVKRAK