| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0719 |
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| Symbol | |
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| ID | 2740626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 753602 |
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| End bp | 755755 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637159594 |
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| Product | bacteriocin ABC transporter, ATP-binding/permease protein, putative |
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| Protein accession | NP_971331 |
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| Protein GI | 42526233 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00348631 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTAA TTAGACAATT TGACGGGACG GATTGCGGGG CGGCTTGTCT TGCTATGGTT
GCATCCCATT ACAAAGCAAA ATACTCTGTA ACATCGATCC GTGAAATTGC CGAAACCGAT
ACGCACGGTA CAAATCTTGC GGGTCTTGTA AAAGCTGGCG AAGCTATGGG CTTTTCGGTG
CAAGTTTTAA AAGGCGATAA AGAAGCCCTA AGCCAAGACC TGCCGCTTCC CTTTATTGTC
CATATAAAAA AATGTGAAGA AAAAAGAGAA TTTTTTCATT TTGTTGTTGT CAAAAAAATA
AAAAACAAAA AACTTACAAT ATACGATCCA GCAGGGGAAA AGAAAAAAAT TGATATTGAA
GAGTTTGCAA AAACATGGAC GGGGTATACT GTTTTTCTTA GTCCCTCAGC AGAGTTTAAA
ATACAGGATA ATACCAAAGG ATTTTTTGAA CGCTTTGTTC CGCTTTTAAA ACCCTATATT
CACGAAATAA TTCAAGTTAT AATAGCATCT TTTTTATTGA CCTTTTTGGG TATTATAAGT
TCCCTTTATT TTAGATACAT AATAGATGAT GTAGTTTACT CAAAAGCTTT TACATCTCTT
ACAAGTCTTT CTATAGGAAT AATTGTTTTA ACTCTTTTTT CGTCAGGGCT TTCTGCGGTG
CGTTCTCATA TTATTTTGTT TTTTTCATTA AAGATGGATT ATCATCTTAT CTTTTCATAT
TTTAAGCATG TGTTTTCTCT ACCTATAAAA TTTTTTGATA CAAGAAAAAC GGGCGAAATT
CTTTCCCGCA TAAATGATGC TCAAAAGGTC CGTTCCGCCC TTTCCGGAAC GGCGGTTTCG
GTTGTCATTG ATTCTTGTAT GGTAATTATT GCAGGCGTGG TACTTTATTT TAAATCTCCC
TTTCTTTTTT GGATAGGTCT TATTACCGTG CCTTTATCTT CCATTATAAT ATGGCTTTTT
TCAAAAAAAT TTGCAAAGGC CTACCGTGAG CTTATGGGAC AATTATCAGA AGTACAGTCA
TACTTGGTTG AAGCCGTTTC AGGGGCTGCC TCATTAAAGG CCCTTAATGC AGAAGATTCA
GTTTATGATG AATATGAAAA AAGAGAGGTG AAAGCCGTAA AAATAAACTA TAGGCTTGGA
GTTTTAAGCA ATATTCAGTC TTTTTTAAAT TCTATTTTGA CGGGTTGGAG TTCCAACATT
ATTTTTTGGG TGGGGACTTA TTTAATTTTA AAAGATCAAT TTACTGTAGG ACAGCTTATC
TCATTCAATG CTCTTTTGGG CTTTTTTACA GGTCCTTTAC AGAGGCTTTT GACGCTGCAG
CCTAGCTTGC AGGAAGCCTT CGTTGCAGGA AGCCGTTTGG GAGAGATTTT CGATTTAAAA
AAGGAAATAG CAGATGAAGG GTATTGGATA AAACCTGAAA AAATTTTAGG CAATATCGAA
ATCAAAGACC TGATTTTTAG ATATGGAACA CGTAAGCCTG TTTTAAATAA GATATCTTTA
AATATAAATG CAGGAGAAAG TATAGGCTTT GTCGGAGCAT CAGGCTCGGG AAAAACAAGC
CTTATTAAAC TGCTTTTAAA ATTTTATTCG CCTGAATCAG GCTCAATAAA AATTGATGGA
CATAATATTG AAGATATAGA TACAAAGACT CTGCGTGCAA AAATAGGTTA TGTGCCTCAA
GACATCTTTT TATTTTCCGG AACTATTGCA GAAAATATTT CTATTCATGA TGACAATGCT
TCTATTGAAG ATATTATAAG GGTCTCTATG GAAACGGGAG TACACTCTTT TGTCGAAAAC
CTGCCTGAAA GATATAATAC GGTCCTTGCA GAAAGAGGAA TAAGCCTTTC TGGAGGAGAA
AGACAGCGTA TAGCCCTTGC CCGTGCCCTT ATATCGGACC CTGACCTTTT AATCTTTGAT
GAAGCTACAA GTAATCTTGA TACAATATCC GAAAAACAAA TTCACGGTAT AATCGAAAAT
ATAAAAACAA AAAAAATAAC AACTCTTATG ATTGCACATA GGCTTACAAC CGTAAAAAAT
TGCGATAAAA TTTTTGTAAT GCAAAACGGC GTAATTGCCG AAGAAGGAAA TCACTCATCT
CTTTTAGAAA AAAAAGGCTT ATACTATAAG TTATGGAATG GAGATATCCT ATGA
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| Protein sequence | MRLIRQFDGT DCGAACLAMV ASHYKAKYSV TSIREIAETD THGTNLAGLV KAGEAMGFSV
QVLKGDKEAL SQDLPLPFIV HIKKCEEKRE FFHFVVVKKI KNKKLTIYDP AGEKKKIDIE
EFAKTWTGYT VFLSPSAEFK IQDNTKGFFE RFVPLLKPYI HEIIQVIIAS FLLTFLGIIS
SLYFRYIIDD VVYSKAFTSL TSLSIGIIVL TLFSSGLSAV RSHIILFFSL KMDYHLIFSY
FKHVFSLPIK FFDTRKTGEI LSRINDAQKV RSALSGTAVS VVIDSCMVII AGVVLYFKSP
FLFWIGLITV PLSSIIIWLF SKKFAKAYRE LMGQLSEVQS YLVEAVSGAA SLKALNAEDS
VYDEYEKREV KAVKINYRLG VLSNIQSFLN SILTGWSSNI IFWVGTYLIL KDQFTVGQLI
SFNALLGFFT GPLQRLLTLQ PSLQEAFVAG SRLGEIFDLK KEIADEGYWI KPEKILGNIE
IKDLIFRYGT RKPVLNKISL NINAGESIGF VGASGSGKTS LIKLLLKFYS PESGSIKIDG
HNIEDIDTKT LRAKIGYVPQ DIFLFSGTIA ENISIHDDNA SIEDIIRVSM ETGVHSFVEN
LPERYNTVLA ERGISLSGGE RQRIALARAL ISDPDLLIFD EATSNLDTIS EKQIHGIIEN
IKTKKITTLM IAHRLTTVKN CDKIFVMQNG VIAEEGNHSS LLEKKGLYYK LWNGDIL
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