| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0714 |
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| Symbol | |
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| ID | 2740621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 747773 |
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| End bp | 749260 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637159589 |
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| Product | capsular polysaccharide biosynthesis protein |
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| Protein accession | NP_971326 |
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| Protein GI | 42526228 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00136687 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGTC CTATTAAACA AAAAACTTCT ATATATATAG TAGGCGCAGG TCTGGCCGGA
ACTATGATTG CACATGAAAT TTCTGAAAAA AACATATTCG GTAAGGTTGC CGCATTCTTA
GACGATGACC CTAAAAAAAT CGGAACTAAG ATTGACGGGA TTCCGGTATT CGGGCCTATA
AGTGAAACGG TTCATCTGAT AAGGATAGAT GCAGGGGATG AGGCTCTGAT TGCAATTCCC
AGCATGCGCT CCGAGCGTTT GCGTGAAATA TATGAGCTTT TAAAATCGGC AGGTTTTTCA
AAAATAAAAC TTCTGCCCGC AATTTCGCAA ATCATTGACG GTTCAGCTCA TTTGGTACAA
GCCCGCGAAA TAGATCCGCA GGATTTACTT ACCCGAACCC CCGTTACCAT TTCTTTAAAA
AAGAGTTTGG CTTATCTACG CGGAAAGCGA GTTCTAATTA CCGGCGCCGG AGGTTCTATC
GGAAGCGAAC TCTGCCGGCA GCTTTTATCG GGCGGTGCCG AACGCCTCTA TCTTTTCGGT
CATGGAGAAA ATTCCATTTA TCAAATTTAT AAAGAACTTA AAATATTGCA AGCAGGCGGT
GTCGGCGACA AGGCTACAAT TGTTCCGGTT ATAGGAGAGT TAAAAGACCG CGAGTACATG
CGCTACATCA TTAAGCAATT AAAATGTGAT GCGGTTTTTC ATACGGCGGC TTATAAACAT
GTTCCTTTGA TGGAAGAAAA TCCTGTTGCG GTTATCGAAA ACAATGTTTT CGGAACAAAG
AATCTTTTGG ATGCCTGCAT CGAATTCGGA GTAAAACGAT TTGTTTTAAT TTCGACGGAT
AAGGCTGTTG AGCCTGTTTC GGTTTACGGC GTTTCAAAAC TATTAAGCGA AAAATTGGTA
TTGCAGGCTG CCGAAACCGT AAAAGAAAAA AAAGATTCAG CCTACATGTT TGTCCGCTTC
GGAAATGTTT TGGGATCGAG GGGATCTATC TTTCCGCTTT TTGTAGAGCA GATACAAAAC
GGGGGACCCG TAACCGTAAC CGATAAAAAG ATGATCCGCT TTTTTATGAC AATTCCGGAA
GCTTGTTCAT TAGTATTGCA GACAGGCGGT GTTGGAAAAT CGGGTGAGTC CTATCTTCTC
GACATGGGAG AACCTGTAAA TATTTATGAG ACGGCAAAGC AGTTGATAAG TTACATGGGT
TTTGAACCTG AGAAGGATAT TAAGATAGAA ATAATCGGCC CCAGAGAAGG CGAGCGTTTG
GAAGAGCCTC TTTGGTCATC AACCGAGTAT CTTGAAAAAA CGGATTACGA AAAAATCATG
CGCTTACGTG ATAAAAAAGA ATTCGATTCT AAAAACTTAA ATGAAATTTT AAATACCCTA
TATCCGTTTT GTTTTTATAG TGAAGAACAC AAAGACGATT TCCGCAATAA AGAAAAGATG
CGCAATTTTT TGGAAGAAAA TAAATTATTA ATTTATAAAA AGGAGTAA
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| Protein sequence | MNRPIKQKTS IYIVGAGLAG TMIAHEISEK NIFGKVAAFL DDDPKKIGTK IDGIPVFGPI
SETVHLIRID AGDEALIAIP SMRSERLREI YELLKSAGFS KIKLLPAISQ IIDGSAHLVQ
AREIDPQDLL TRTPVTISLK KSLAYLRGKR VLITGAGGSI GSELCRQLLS GGAERLYLFG
HGENSIYQIY KELKILQAGG VGDKATIVPV IGELKDREYM RYIIKQLKCD AVFHTAAYKH
VPLMEENPVA VIENNVFGTK NLLDACIEFG VKRFVLISTD KAVEPVSVYG VSKLLSEKLV
LQAAETVKEK KDSAYMFVRF GNVLGSRGSI FPLFVEQIQN GGPVTVTDKK MIRFFMTIPE
ACSLVLQTGG VGKSGESYLL DMGEPVNIYE TAKQLISYMG FEPEKDIKIE IIGPREGERL
EEPLWSSTEY LEKTDYEKIM RLRDKKEFDS KNLNEILNTL YPFCFYSEEH KDDFRNKEKM
RNFLEENKLL IYKKE
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