Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0709 |
Symbol | msrA |
ID | 2740616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 744571 |
End bp | 745524 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637159584 |
Product | bifunctional methionine sulfoxide reductase A/B protein |
Protein accession | NP_971321 |
Protein GI | 42526223 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00161368 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAG AAATATATCT TGCAGGCGGC TGCTTCTGGG GCGTTGAAGG ATATTTTCGC CAAATTCCCG GTGTTAAAGA AACGGACACG GGTTATGCAA ACGGAAAAAA CGATTCTGCA AACTACAAGG GATTACATCA GAGCGATCAT GCCGAGACTG TTAAGATAGT TTATGATTCT TCGGTAGTAA GTTTACAGGA ATTATTGGCT CATTATTTTA GAATAATAGA CCCCACATCT TTAAACAAAC AGGGAAACGA TGCAGGCCGT CAATACAGAA CAGGTATTTA TTATGTAGAT GATTCTATGA TTAAAGAAAT AAATAGTTTT GTAAAGTTTA TGCAAAAAAA ATATTCGAGG CCCATTGTTG TTGAGGTAGA AAAACTTAAG CATTTTATTC TTGCAGAAGA CTATCATCAA GACTATCTTC AAAAAAATCC CGGAGGATAT TGCCACATAG ACTTAACCCT TGCTTTAAAA CCTCTTTATG ATGAAAGTAA ATTTAAAGTA CCGTCAAAAG AAGAATTAAA AAAATCCTTA AAACCGATAC AGTTTTCGGT TACACAAGAA AAGGCAACGG AAAGACCCTT TACAAGCGAA TATGATAAAT TCGATGCTGA AGGAATTTAT GTTGATATTA CCACAGGGAA ACCTCTTTTT TCTTCATTAA ATAAATATGA TGCAGGCTGC GGATGGCCAT CATTTACAAA GGCTATTACA ACACAGGCCC TTCAATATTT GGAAGACAAA AGCCTCGGCA TGAACAGAAC TGAAGTCGTA TCAAAAACAG GCGGAGCTCA CCTAGGCCAC GTCTTTGATG ACGGCCCTGC CGATGCAGGA GGCTTACGCT ATTGCATTAA CGGTGCGGCC TTACGCTTTA TCCCCTACGA TAAAATGGAA AAAGAAGGCT ACGGCGATTA TCTTCCCTAT GTAAAACCTA CGGGGAATTT TTAA
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Protein sequence | MIKEIYLAGG CFWGVEGYFR QIPGVKETDT GYANGKNDSA NYKGLHQSDH AETVKIVYDS SVVSLQELLA HYFRIIDPTS LNKQGNDAGR QYRTGIYYVD DSMIKEINSF VKFMQKKYSR PIVVEVEKLK HFILAEDYHQ DYLQKNPGGY CHIDLTLALK PLYDESKFKV PSKEELKKSL KPIQFSVTQE KATERPFTSE YDKFDAEGIY VDITTGKPLF SSLNKYDAGC GWPSFTKAIT TQALQYLEDK SLGMNRTEVV SKTGGAHLGH VFDDGPADAG GLRYCINGAA LRFIPYDKME KEGYGDYLPY VKPTGNF
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