Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0705 |
Symbol | |
ID | 2739827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 739429 |
End bp | 740358 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637159580 |
Product | SPFH domain-containing protein/band 7 family protein |
Protein accession | NP_971317 |
Protein GI | 42526219 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00195694 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGCTT TATATGTTGC TCTGGTCGTA GCGGTTATTA TTTTATTTTC GATAGCTGTT GTAGTTCCGG AACAAGAAAG TTATGTTATT GAAAGGCTTG GAAAATATTC GCGGACTCTT ACTGCGGGTT TCCATATCTT AACCCCATTT ATAGACAGGA TTGCTTATAA GCAAAATCTA AAGGAAGAAG CCTTGGACGT AGATCCTCAA GTTTGTATCA CGGCCGATAA CGTTCAGGTA CAGGTTGACG GAATTCTTTA TCTAAAAATA TTCGATCCGG TTAAGGCAAG CTATGGAATC GATAATTACC GCTATGCAGT CGCCCAGCTT GCAAAAACAA CTATGCGAAG CGAAATAGGA AAACTGGAAC TTGATAAAAC TTTTTGCGGA AGAGAAGGCT TAAACGACAA TATAGTAAAG GCCCTCGATG AAGCTTCCGA CAACTGGGGC ATAAAGGTTA CCCGCTACGA AATACGGGAT ATTACGCCTA CCCGCACAAT CCTCGAAGCC ATGGAAAGGC AGATGAGGGC CGAAAGAGAA AAGCGGGCTA ATATTCTTTC GAGTGAAGGA AAACAGCAGT CCCGAATAAA TATTTCTTTG GGTAAAAAGA AAGAAGCTAT AAACAAGGCT ATGGGCGAAA AGCAGCGAAG AATCAATCTT GCCGAAGGCC GCTCAAAGGC TATAGAGATA ACGAGTAATG CGACAGCCGA AGGCTTGCGT TTAATTGCAG ATGCGCTTTC TCAACCGGGA GGAAGAACGG CTATGGGCAT CCGTCTTGCC GAAAACTATA TTCAAAGGTT CGAGCATATT ATTAAAAAAT CAAATGTTTC GGTTTACCCC GAAAACATTG CAGGCCTTGC AGCCTTTAGC GATATCATTA AAAATGCAGG AAAAGAAGTG AAGGTCATAC AGGGAGGTCA AAATGCTTAA
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Protein sequence | MIALYVALVV AVIILFSIAV VVPEQESYVI ERLGKYSRTL TAGFHILTPF IDRIAYKQNL KEEALDVDPQ VCITADNVQV QVDGILYLKI FDPVKASYGI DNYRYAVAQL AKTTMRSEIG KLELDKTFCG REGLNDNIVK ALDEASDNWG IKVTRYEIRD ITPTRTILEA MERQMRAERE KRANILSSEG KQQSRINISL GKKKEAINKA MGEKQRRINL AEGRSKAIEI TSNATAEGLR LIADALSQPG GRTAMGIRLA ENYIQRFEHI IKKSNVSVYP ENIAGLAAFS DIIKNAGKEV KVIQGGQNA
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