Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0702 |
Symbol | |
ID | 2739824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 737334 |
End bp | 738059 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637159577 |
Product | ABC transporter, ATP-binding protein |
Protein accession | NP_971314 |
Protein GI | 42526216 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGCCA TTGTAACTGC ACAGCTTACA AAAAAATACG GCGGTATAAC TGCTGTAGAT AATCTTAATT TAACTGTTGA GCAAGGTGAA TTATTTGCCT TACTCGGTGT GAACGGAGCT GGAAAAACCA CAACAATTAA AATGCTTTCT TGTCTAATAA AACCCACGAG CGGTGATGCC TTGTTGCTTG GCAACAGTAT TATTTCAGCA TCCCATGCAA TAAAGAAAAA AATAAATATT TCTCCTCAGG AAACGGCGGT AGCCGCTAAT TTGTCGGTTT TAGAGAACTT GGAACTTATT GCGGGAATCT ACGGGCAAGA CAGTAAAACA GCAAAGAAAA ACGCTTACGA GATAGCTCAA AAATTCAAAT TGGAAAATGA ATTGAACAAA AAAGCAAAAC ACTTATCGGG AGGTATGCAG AGGCGCCTTT CTATTGCAAT GGCACTGATT TCAGATCCGC AGATTTTATT TCTCGATGAA CCGACCCTAG GACTTGATGT ATTGGCTCGC CGTGAGTTAT GGGCATCCAT TAAAGAGTTA AAAGGAAAAG TGACAATTAT ACTCACAACT CATTATATGG ATGAAGTTGA AACGCTGTCC GATCGTGTCG GAATAATGTC AAAAGGCAAG TTAAAAGCGA TGGGTACGGT ACAGGAATTA ACTATGCAAA CAGATACTGT CAAGCTGGAG GACGCTTTTG TTATACTTTC CGGAGGTGTG TTATGA
|
Protein sequence | MSAIVTAQLT KKYGGITAVD NLNLTVEQGE LFALLGVNGA GKTTTIKMLS CLIKPTSGDA LLLGNSIISA SHAIKKKINI SPQETAVAAN LSVLENLELI AGIYGQDSKT AKKNAYEIAQ KFKLENELNK KAKHLSGGMQ RRLSIAMALI SDPQILFLDE PTLGLDVLAR RELWASIKEL KGKVTIILTT HYMDEVETLS DRVGIMSKGK LKAMGTVQEL TMQTDTVKLE DAFVILSGGV L
|
| |