Gene TDE0690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0690 
SymboltrmU 
ID2740249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp727038 
End bp728138 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content39% 
IMG OID637159565 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionNP_971302 
Protein GI42526204 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.253625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTGC TTGTGGGTTT GAGCGGAGGC GTTGATTCCG CTGTTGCGGC AAAACTATTG 
ATAGATCAAG GCTATGATGT TACAGGAGTT ACAATGCAGC TCTTGCCTAA ACTATCAGGC 
ATTTATAAAG AGCAGACCGA TGATATTGAA GATGCAAAAA AAGTTGCAGA CAAGCTCGGT 
ATAAAACACA TCGTATACGA TATGAGGGAA ACTTTTAAGA CTGAAATTAT AGACTACTTT 
GTAGAAGAGT ACAAACAAGG AAGAACGCCG AATCCATGCT TTATATGTAA CAGCAAAATA 
AAATTCGGTC TTTTTTTAGA GCAAGCCTTA AAGGACGGCT TCGATAAAAT TGCAACAGGC 
CATTATGCAA AAATAGAAAA AACCGAAATT GAAGGCGATG AAAGATTTTT ATTAAGACAG 
GCTGAGGATG CTCAAAAAGA CCAAAGCTAT TTTTTAGCCC TTCTTACTCA AGAACAGCTT 
TCCCGTTCTA TTTTTCCTTT AGGAGATTTT ACCAAAGAAA AAGTGAGAAG CATAGCCGAA 
GATGCCGGTC TTATAAATGC TCACCGTCCC GACAGCCAAG ACATCTGTTT TGTTCCAGAT 
GACGATTATA CAAGGGTAAT AAACGCCCTT GCTGCGGGTT CTTTTAAAGA GGGAAAATTC 
ATTGATACAA TGGGAAATGA AATAGGCCGC CACAAAGGGC TTCAATATTA TACCATAGGT 
CAAAGGCGGG GCCTTGCAAT CGCAATGGGG TATCCCGTCT ATGTTGTAAA AAAAGATGCG 
AAGACGAATA CGGTTACCGT AGGCAAGGAT GAAGAACTCT TTGCCGAAAG CCTCATCGCT 
TCAAGGGTAA ATATAATCTT AAAAAAAACA ATAGATAAAG AAATCGATAT TGAGGTAAAA 
ACACGATACC GCCAACAAAA GAAAAAGGCA AAATTGATTC CGCTTAAAAA TGAAGAGTTT 
AAACCTACGG GAAAATTTAA GGTAGAATTT ATAGAGCCTG AAAAAGCCGT CGCCGAAGGA 
CAAGCCGCTG TTTTTTATAC CGGTGATTAT ATTATCGGCG GCGGCATAAT AGAATCGGTT 
GAGAGGCTGG GAATACTTTA A
 
Protein sequence
MKVLVGLSGG VDSAVAAKLL IDQGYDVTGV TMQLLPKLSG IYKEQTDDIE DAKKVADKLG 
IKHIVYDMRE TFKTEIIDYF VEEYKQGRTP NPCFICNSKI KFGLFLEQAL KDGFDKIATG 
HYAKIEKTEI EGDERFLLRQ AEDAQKDQSY FLALLTQEQL SRSIFPLGDF TKEKVRSIAE 
DAGLINAHRP DSQDICFVPD DDYTRVINAL AAGSFKEGKF IDTMGNEIGR HKGLQYYTIG 
QRRGLAIAMG YPVYVVKKDA KTNTVTVGKD EELFAESLIA SRVNIILKKT IDKEIDIEVK 
TRYRQQKKKA KLIPLKNEEF KPTGKFKVEF IEPEKAVAEG QAAVFYTGDY IIGGGIIESV 
ERLGIL