Gene TDE0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0653 
Symbol 
ID2739201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp689063 
End bp689734 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content39% 
IMG OID637159529 
Producthypothetical protein 
Protein accessionNP_971266 
Protein GI42526168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00000750609 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACG AATTATATGA AAAAACTTTT ACAAAACCTA TAATAAGGTA TGGAAGGTTT 
ACAAACCTAT TATCCTTGGT TCTTTGCTTT CTGCCTTCAA TTCTTGTTTG GGTCGTTTAT 
GGAGTAAAGC CGTCAACACA GGATATATTG ACAGGTTGGG GCTTGGCAGC ATCCGTATAT 
GCAATCTATG CCGTTGTTGA ACCTATCAGT TATTTCCCCA TACTCGGCTT ACCCGGAACT 
TATATGTCTT TTCTTTCCGG TAATATCGGA AATGTACGCT TGCCTACTTC GGCCGTTACG 
CAAGAAGCTG TCAGCGTAGA ACCCGGTACA AAGAAAGCCG AAATAGTTTC TACCCTCGGT 
ATTGCAGGGT CGATAGTTAC CAATCTTATA ATTGTAACTA TTGCCGCTGT AGGAGGAGCG 
GCTTTAATGA ACATCTTCCC CAAAAAAGTA TTGGAAGCCT TTGCCTATGT TTCGCCTGCA 
ATCTTCGGTG CTATGTTTGG AATGTTTGCC GTTAAAAATA TAAAATACGG CATATTTGCT 
TTTATTTTAG CTATGGCCTT ATTAAATCTT GTTAAAATAC CGGTATATGT AATGATTCCG 
GCTTGTGTAT TCGGAACGGT AGCTTTCGGT TTTTTAACTT ACAAAAAACC TAAGACTGAA 
GAACAAGCTT AA
 
Protein sequence
MSDELYEKTF TKPIIRYGRF TNLLSLVLCF LPSILVWVVY GVKPSTQDIL TGWGLAASVY 
AIYAVVEPIS YFPILGLPGT YMSFLSGNIG NVRLPTSAVT QEAVSVEPGT KKAEIVSTLG 
IAGSIVTNLI IVTIAAVGGA ALMNIFPKKV LEAFAYVSPA IFGAMFGMFA VKNIKYGIFA 
FILAMALLNL VKIPVYVMIP ACVFGTVAFG FLTYKKPKTE EQA