Gene TDE0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0645 
Symbol 
ID2740476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp680659 
End bp681375 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content36% 
IMG OID637159521 
Producthypothetical protein 
Protein accessionNP_971259 
Protein GI42526161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0164961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA TTCAAACCGA AATTCGGAAT CACAAGAGCC TTAAACTTCT TGCGGCATAT 
CTTCTCATAT TCCTTTTTTT AATTGATATT AATGCTCAAA CATCAACAAT AAGTTTTAAA 
GCCGATAAGG TAACAGCCTC GGTATCTGAA AATAAAAAAT CGACCAATTT AATAGGAAAT 
GCCGAAGTCA AGGTAGACAG CTTAACCATA TCGGCAGACC GTATCGAAAT TTTCGGAAAA 
GACTATAGAT ATGTAAATGC AACAGGTTCG GTCAAGGGCG AGGATGACGA AAAAGGGTAC 
AGCTTTAAGG CCGATTTAAT CAATTTTGAC AGAAAAACCG ATACGGTTAC GATGTTCGGA 
AAACTGGAGC TTAAAGACAC AAAAAATGAT GTCAGTATTA ATGCCGAAAA TATTGAATAT 
AAAAAAAAGC AAGAAATAAT TATCATGCGC TTTAATGTAA AGATAATAAA TAAAGATATA 
AACTGTAATT CAATGTTTGC TTTTTATAAT AGAAAAGAAT CAAAGGTAGA ATTAACAGGC 
AGTCCCATCG TAAAAAAAGG AAAGGACGAA TTTAGGGCCG GAAAGATTTC CGTTAATTTG 
GATACGGAAG ATATAACCCT TGACGGCCGA GTCAGAGGTT CCGTCGAGCA GGGAAAGGAC 
GAACCCCAAG CTGAAACCAA ACAGGAACAA AATCAAGAGG AAAAACCCAA TGATTGA
 
Protein sequence
MKKIQTEIRN HKSLKLLAAY LLIFLFLIDI NAQTSTISFK ADKVTASVSE NKKSTNLIGN 
AEVKVDSLTI SADRIEIFGK DYRYVNATGS VKGEDDEKGY SFKADLINFD RKTDTVTMFG 
KLELKDTKND VSINAENIEY KKKQEIIIMR FNVKIINKDI NCNSMFAFYN RKESKVELTG 
SPIVKKGKDE FRAGKISVNL DTEDITLDGR VRGSVEQGKD EPQAETKQEQ NQEEKPND