Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0629 |
Symbol | dnaJ |
ID | 2739354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 662727 |
End bp | 663908 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637159505 |
Product | chaperone protein DnaJ |
Protein accession | NP_971243 |
Protein GI | 42526145 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.976387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTAG AGGTTCCGAA ATTTTTACAC TGGGAGTTTT TAGTGCCGGC ATCTAAAAGA GACTATTATG AGGTTTTGGG CGTAGATAAA AAAGCCTCAA ACGATGACAT CAAAAAAGCA TATCGAAAAT TAGCAATCAA ATATCATCCC GATAAAAACC AAGGGGATAA GGCTGCTGAA GAAAAATTTA AAGAAGCAAC CGAAGCTTAT GAAATTCTTA TCGACGAAAA AAAGCGCAGC ATGTATGACC AATTCGGCCA TGCCGGCGTA GACGGAATGT CGGGCGGCGG AGGCTATGAT CCTTCCGCCT TCCAAGGTTT TGAGGATATC TTCGGCGGAA GCTTTTCGGA TATTTTTGAA AATCTATTCG GAGGAGGGTT TTCTTCCCGC TCATCAGGTT TCGGCGGCCG CCATGCAGGT CCTGTCCGCG GTTCTAACCT GCGCTATGAT CTTCAAATTT CTTTTGTTGA TGCCGTTTAC GGTAAAAAAG CCGAACTCAG TTATACCCGC AATGAAAAAT GTTCCGAATG TCATGGAACA GGCAGCGAAA GCGGAAGCTC AAAAAGAATG TGTCCCGATT GTAAGGGTAC GGGACAAGTG CGCCAAAGTA CCGGTTTCTT TTCCATATCG AGACCATGTC CTACCTGCGG CGGCGAAGGC TCCATAATCG AAAAACCATG TAAAAAATGC GGAGGAAACG GCTTAGAGCG TAAGAAACAG CGCATAATCG TTACCATTCC TGCCGGTGTC GAAAACGGAA AACGGATTAC GATTCCCAGT CAAGGAAATG CCGGTCAGGC CGGCGGAGAC TACGGCGACC TCTTTGTATT TATCTTTGTT CAAGCTCATC CTTATTTTGA ACGTAACGGA ATAGACCTCT ACTGTGCTGT TCCCATATCA ATGACTCAGG CAGCCTTGGG CGGGGAAATA AACATCAAAT CTCTCGATGA AAAAACATTG AGACTAAAAA TTCCGGCCGG AACACAAAAC GGAAAACTTT TAAGGATTCG AGGCGAAGGT GTTCCTACGG GAATAGGCCG AAAGGGCGAT CTTTATATTC AAATTCAAGT GCAAATTCCT TCAAAATTGT CATCAAATTC AAAAAAACTT TTGCAAGAAA TTTCGGCGAT TGAAGGTGAA AATGAAAATC CTAATCTTAT CCCTTTAAAA GATTTACCTT AA
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Protein sequence | MFLEVPKFLH WEFLVPASKR DYYEVLGVDK KASNDDIKKA YRKLAIKYHP DKNQGDKAAE EKFKEATEAY EILIDEKKRS MYDQFGHAGV DGMSGGGGYD PSAFQGFEDI FGGSFSDIFE NLFGGGFSSR SSGFGGRHAG PVRGSNLRYD LQISFVDAVY GKKAELSYTR NEKCSECHGT GSESGSSKRM CPDCKGTGQV RQSTGFFSIS RPCPTCGGEG SIIEKPCKKC GGNGLERKKQ RIIVTIPAGV ENGKRITIPS QGNAGQAGGD YGDLFVFIFV QAHPYFERNG IDLYCAVPIS MTQAALGGEI NIKSLDEKTL RLKIPAGTQN GKLLRIRGEG VPTGIGRKGD LYIQIQVQIP SKLSSNSKKL LQEISAIEGE NENPNLIPLK DLP
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