| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0621 |
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| Symbol | |
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| ID | 2740466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 653454 |
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| End bp | 654836 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637159497 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_971235 |
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| Protein GI | 42526137 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.27098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTAA ATTCAAAACC GGTTGTAAAT TTAAAATCGG TATTTTCGGA TAAATCTTTT
TTAAAAAACT TATTTATAAT TGCCGTGCCT ATAATATTGC AAAATTTTAT AAGCTCCTTT
GTAAATATTT TAGACACGAT AATGATAGGC CGTTTGGGCA CTATTGAACT TGCTGCCGTA
GGGCTGGGAA ATCAATTGTT TTTTTTATTG AACTTGATTT TGTACGGCAT AGGGTCGGGG
GGCATGGTCT TTACTGCTCA ATTTTGGGGC AAAAAAGATT TTAACGGCTT ACAAAAAACT
TTTGCCCTTT CTCTCATGGT TGCAGTTTTT TTCAGTGCCA TCTTTACACT GGCCTGCACT
ATTTTCCCGA AAGAAATTTT ATCCCTCTAT TCAAAAGATG CGGCTGTAAT CGAAAAGGGT
GTAGACTACC TCGGCATTTC GGCATTTTGC TTTTTGCCCT TTGCGGTAAA CTTTATTTTT
ATGATTACCC TCCGTTCTAT AGAAAAGGTA AGGGTAGCGG TTGGTGCAAC GCTAGTTTCA
CTTTTTGTAA ACCTTATACT GAATGCCGTT TTGATTTTCG GTTTGTTGGG CTTCCCCGCA
CTCGGAGTTA AGGGGGCGGC TATTGCAACG GTGGCTTCCA GAGCCGCCGA GCTTATCATT
CTTTTTTCGG TAACAAAGAA AAAGAAATAT CCCATACTCG GAAAACTCAA AAATCATTTT
GACTTTGATT TTAAATTTAT CAGACAATAC TTTGCGATAG TTATGCCGGT TCTAATAAAC
GAATCTTTGT GGTCTTTAGG TATTACCTTT CATCATAAAA TATTTGCAGG AATCGGTACC
TTTGCCTATG CCGCCTACAA TATTACAAAC ACGGTTTCGA TGTTGACATG GGTTATTTTT
ATAGGCTTCG GAAACGGAGT CAGCGTCTTA ATAGGAAAAA AAATCGGAGA GAGAAATTAC
GATGAGGCAA AAACTTATGC GGCAAAGGTT TCAATCTTTG TGCCCTTTGT TGCCGTTTTT
GTCGGTGCTA TGTTAATTCC GATTTCGTAC TTGACTCCTA TTTTCTTTAA TGTAGAAACA
GTGGTTTTGC AGACCGTTAT GAAGCTTTTT ATAATTTTAG CCTGCTGTTA TCCCTTAAAA
GCGTTTAACA TGTGTATGCT TGTGGGCATA ATAAGGGCGG GAGGCGATAC CCGTTTCGGT
ATAATCTGCG ATACGGCAGT TATGTGGTGT GTTTCCATTC CTCTGGCATA TTCTTTGTCG
GTTTATACTT CTATTCCGGC ATGGGGAATT TATATTTGTC TTTTTAGCGA AGAACCTTTT
AAGGCCCTTC TGGGGCTTTG GCGTATCAAG TCAGGTAAAT GGCTCCGCTC CGTTACGGAT
TAA
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| Protein sequence | MTVNSKPVVN LKSVFSDKSF LKNLFIIAVP IILQNFISSF VNILDTIMIG RLGTIELAAV
GLGNQLFFLL NLILYGIGSG GMVFTAQFWG KKDFNGLQKT FALSLMVAVF FSAIFTLACT
IFPKEILSLY SKDAAVIEKG VDYLGISAFC FLPFAVNFIF MITLRSIEKV RVAVGATLVS
LFVNLILNAV LIFGLLGFPA LGVKGAAIAT VASRAAELII LFSVTKKKKY PILGKLKNHF
DFDFKFIRQY FAIVMPVLIN ESLWSLGITF HHKIFAGIGT FAYAAYNITN TVSMLTWVIF
IGFGNGVSVL IGKKIGERNY DEAKTYAAKV SIFVPFVAVF VGAMLIPISY LTPIFFNVET
VVLQTVMKLF IILACCYPLK AFNMCMLVGI IRAGGDTRFG IICDTAVMWC VSIPLAYSLS
VYTSIPAWGI YICLFSEEPF KALLGLWRIK SGKWLRSVTD
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