| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0610 |
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| Symbol | |
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| ID | 2739166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 646447 |
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| End bp | 647376 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637159486 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, putative |
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| Protein accession | NP_971224 |
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| Protein GI | 42526126 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000157689 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAA AAGGAAAGAA AATTAAGGTT GCCGTTGTAG GCGACGGAAC GATGGGACAC
GGTATTTCCG AGGTCTTCGC AAAAGCAGGA CATACAGTCC AAATAATAGG ATTAAACGAT
GCAAGTCTTA AATCGGCTCT TGACAGAATT AAATTAAGTC TTAACGAATT TGTTGCCGAA
GGACTTGTTT CTGCATCCGA CATTGATACT ATAGTCGGCC GTATAAGCTT CAGCACCGAT
ATCCAAAAAG CCGAAGATGC GGCTATTGTT ATTGAAGCCT TGCCGGAAAA TATGGATCTA
AAAACCGAAA CATTCGGAAA ACTGGAAAAG ATTTGTCCGC AAGACACTAT TTTAGCAACT
GCCAGCGGAC ACTCTGTTTC AGAGGTAATT GCACAAGTAA AAAAACGCGA TAGAGTAATT
GCTACTCACT TTTGGTTCCC GCCGCAATTG CTGCCTCTTG TTGAAGTATG CGGTGCGCCC
GAAACTTCAA AAGCAACAAT TGACACAACC TGTGAATTGC TGAAAGGTAT AGGAAAAAAA
CCGGTAGTTA TTGATAAAGA AATTGACGGT TTTATCGGTA ACCGAATCCA ATTTGCCGCT
TTAAGAGAAG CATGGGCATT ATACGATTCC GGTGTTGCAA CCGCCGATGC TATAGATTCT
ATCGTGCGTT ACAGCATAGG CCGCCGTTAT TCAGTTACCG GTCCTATTGA ATCCGCCGAT
GTTGCAGGAC TTCCAGTTAT GGTAAACTTT GCTGCTTATC TTCAGCCATC CTTATCAAAC
GATAAAGACC CGCCTGCAAA ACTGTTTGAC TTAGCTAAGG TGGATGGAAA AGTTTATAAC
CGGTCAAAGG CAGAAATTGA TAAATTGATT GCAGCCCGCA AAAAAGAACT GTTCCGTTGG
CTTGCTGCCG ATATGGAAGA AACAAAATAG
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| Protein sequence | MIEKGKKIKV AVVGDGTMGH GISEVFAKAG HTVQIIGLND ASLKSALDRI KLSLNEFVAE
GLVSASDIDT IVGRISFSTD IQKAEDAAIV IEALPENMDL KTETFGKLEK ICPQDTILAT
ASGHSVSEVI AQVKKRDRVI ATHFWFPPQL LPLVEVCGAP ETSKATIDTT CELLKGIGKK
PVVIDKEIDG FIGNRIQFAA LREAWALYDS GVATADAIDS IVRYSIGRRY SVTGPIESAD
VAGLPVMVNF AAYLQPSLSN DKDPPAKLFD LAKVDGKVYN RSKAEIDKLI AARKKELFRW
LAADMEETK
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