Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0602 |
Symbol | fabH |
ID | 2739158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 639926 |
End bp | 640861 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637159478 |
Product | 3-oxoacyl-(acyl-carrier-protein) synthase III |
Protein accession | NP_971216 |
Protein GI | 42526118 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATTA TAATAAAGAC AACAGGGAAG TCTATCCCAA AAAAGATAAT GCACAACAGC GATTTTCCCG CTTCTTTAGA TACTTCGGAT GAATGGATCA GAAGCCACAC AGGGATAGGA AGCCGCTATA TAGCTTCCCA AGAAGACACA AGTGCATCCC TCGGTGCCGA GGCCTGTAAG CAGGTCTTGG CAAATGAAAA TCTAAATCCT CAGGATATAG ACTTAATTAT CTGCGCCACA GCCACGGCAG AATACCAAGG CTTTCCGTCG AATGCCTGTC TTATCCAAAA AGAACTGGGT GCAAAAAATG CGGCATGTTT TGACCTGTCG GCAGCATGCT CAGGCTTTTT ATACGCAATA GATACGGCAG CAGCCCTCAT GGAAAGGCAC GGCCGGCGTT ATGCCCTTGT CTGCGGCACC GAAGTTTTAA GCAAAATAAT CGATTGGCAA GACCGTTCTA CCTGCGTACT ATTCGGAGAC GGAGCCGGGG CAGCCCTCCT TGAAAACACC TTTGATAATT CAAAGCGGGG CATAGGCTCG GTAATTTTAG GTTCTGACGG AACAGGTTAT GAAGCTCTTT ATATGGCAGA CCATCTAAAA ATGAACGGAA GAACCGTCTA CAATTTTGCA GTCGGCGTTA TAACCGAAAC CGTAAAAAGC CTTCTTCAAA AAGAAAACAT CAATATGGAA GATGTAGACT TGGTTGTATG CCACCAAGCC AATAAGCGTA TTTTAGAAGC CGCCGCAAAA AGACTTAACA CCGATATGAG CAAATTCGCA TGCAATATGG AAAACTACGG AAACACTTCG GCAGCTTCCA TTCCGATAAC CCTCGATGAT TTAAGGCTTC AAGGAAAATT AACTGAAGGA ACAACAATAA TTACGGCAGG CTTTGGGGCC GGGCTCACTT GGGGCGGTGC CGTTATAAGA TTTTAG
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Protein sequence | MAIIIKTTGK SIPKKIMHNS DFPASLDTSD EWIRSHTGIG SRYIASQEDT SASLGAEACK QVLANENLNP QDIDLIICAT ATAEYQGFPS NACLIQKELG AKNAACFDLS AACSGFLYAI DTAAALMERH GRRYALVCGT EVLSKIIDWQ DRSTCVLFGD GAGAALLENT FDNSKRGIGS VILGSDGTGY EALYMADHLK MNGRTVYNFA VGVITETVKS LLQKENINME DVDLVVCHQA NKRILEAAAK RLNTDMSKFA CNMENYGNTS AASIPITLDD LRLQGKLTEG TTIITAGFGA GLTWGGAVIR F
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