Gene TDE0572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0572 
Symbol 
ID2741008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp603634 
End bp604794 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content51% 
IMG OID637159444 
Producthypothetical protein 
Protein accessionNP_971186 
Protein GI42526088 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.189978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA GTAATGCAAA GACTAAGGCT TATGCCTTTA GAGGAGGGTC GGCGCTCATC 
ACAGCCGCAG TTTTAGCGCT TGTTGCGCTA TTTGGAATGA CCGGCTGTCC GAACAACGCG 
GGCGGGGGCG GTTCAGGAAG CGGTAACTCC GGCGGAGGCG GGACGCCTGC CGGTAGTTTT 
GAAGACACAG GTGACGGCTT TATAAAAATA ATACCTACGA CAACAGGCAT TGTAGGCGTT 
GACCCTGACT ACACCTTACC CGGAACTGAA GCTAATCGGA AAGGCGTATT CCGTGCAGGC 
CGAAAGGTAA AATTAAGTCC CTACAAGCTC GGTAAAACAG AGGTAACGTA CGAGTTATGG 
TATCAAGTGC GTACGTGGGC AGAAGGTAAG GGCTATACCT TTGCAAACAA AGGGCTTGAA 
GGTTGGGACG GCACAGGCGG CGGAGGTAGT CATCCCAATT ATACAAACAT AGGCAAGCCT 
CCTACAGGAA ACAAAAATCA TCCTGTAACA ATGGTAATCT GGCGGGACTG TATTGTGTGG 
TGTAATGCGT ATACGGAAAA GACGATGGGC GAGGGAGAAT GCGTATACCG CAAAAGCAAA 
ACCGATACTA CCGTATTAAA AGATGCAACT GATACAGCTG CTTGCGATGC AGCCTATGCC 
GATATGGATA AAAAAGGCTT TAGACTTCCG ACTGAAGCTG AGTGGGAATA TGCTGCCCGC 
TGGCAGGGAA GCGATAAAAC AAATGCGGCA CAATACGGCG ATGTATGGTT GACCAAGCTG 
AACAGTGCAA GCGGAGCAAA AGCCGACTGG AATGATGCGG ATGAGACAAA AGCCGTTGCA 
TGGTATAGCG GAAATGCGGG AGGAACAACA CATCCTGTAG GAGAAAGGAG AGCAAATGCA 
CTCGGTTTAC ACGATATGAG CGGTAATGTC TGGGAATGGT GTTTTGATAG GCATGATAAT 
AACCCTGCAT CAAACGATAG TGCTTATGAG CAAGGCGGTA TTGTTACCGA TCCTCAAGGT 
GCCGCGTCAG GCCCTTACCG CGTCAGGCGC GGCGGCAGTT GGGGCGGCAG CGCGGGCGGC 
TGCACTGTAG GCAGACGGGA GGACTACAGT CCTGACAGCA GGTACAACTA TCTTGGCTTC 
CGCCTGGCTT GGCGCCCTTG A
 
Protein sequence
MKTSNAKTKA YAFRGGSALI TAAVLALVAL FGMTGCPNNA GGGGSGSGNS GGGGTPAGSF 
EDTGDGFIKI IPTTTGIVGV DPDYTLPGTE ANRKGVFRAG RKVKLSPYKL GKTEVTYELW 
YQVRTWAEGK GYTFANKGLE GWDGTGGGGS HPNYTNIGKP PTGNKNHPVT MVIWRDCIVW 
CNAYTEKTMG EGECVYRKSK TDTTVLKDAT DTAACDAAYA DMDKKGFRLP TEAEWEYAAR 
WQGSDKTNAA QYGDVWLTKL NSASGAKADW NDADETKAVA WYSGNAGGTT HPVGERRANA 
LGLHDMSGNV WEWCFDRHDN NPASNDSAYE QGGIVTDPQG AASGPYRVRR GGSWGGSAGG 
CTVGRREDYS PDSRYNYLGF RLAWRP