Gene TDE0535 details

Gene Information

• Locus tag: TDE0535
• ID: 2741754
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 577463
• End bp: 578161
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637159407
• Product: ABC transporter, ATP-binding protein
• Protein accession: NP_971149
• Protein GI: 42526051
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGAAA CTATTATCCG TATGGAAAAC GTTACAAAAT TATATGAAAT GGGGGAAAGC 
ATCGTGCATG CCCTGCGAGG CATAAGTTTC AGTATAGATC AGGGAGAATT TGTTTCGATA 
ATGGGGCCGT CAGGTTCGGG AAAGTCTACC TGTATGAATA TGATAGGCTG TCTTGACCGG 
CCGACAAGCG GTATATTGGA AATCGGCGGA AAAGAAACGG CAAAGATGAC GGAAAAAGAA 
CTTGCTGTGC TGCGTAATAA AACGATCGGC TTTGTGTTTC AGCAGTATCA TTTGCTTCCA 
AATATGACGG TTTTAGAAAA CGTTATGCTT CCGTTACGCT ATCAGGGTGT GGAAAGAACA 
AAACGCATTG CACTTGCAAA AGAAGCTTTG GAGCATGTCG ATATGGGCGA TAGACTTTCC 
CACGGTCCTA ACGAACTTTC CGGCGGTCAA AAGCAGCGTG TCGCCATTGC ACGTGCAATG 
GTAACAAAAC CGCACATTAT CTTGGCCGAT GAGCCGACCG GTGCTTTGGA CAGCAAAACA 
GGAGCTCAGG TTCTTAACCT CTTTAAAAAA ATAAATGAAA GCGGAACGAC AATTGTTATT 
GTTACTCACG ACCCTGGAAT CGGAGCAAGT GCGGATCGAT GTATAAAACT TTTTGACGGA 
AATATTCAGT CGGATGAACA TCAGGTTCCT GTTACTTAA 

 

Protein sequence

MGETIIRMEN VTKLYEMGES IVHALRGISF SIDQGEFVSI MGPSGSGKST CMNMIGCLDR 
PTSGILEIGG KETAKMTEKE LAVLRNKTIG FVFQQYHLLP NMTVLENVML PLRYQGVERT 
KRIALAKEAL EHVDMGDRLS HGPNELSGGQ KQRVAIARAM VTKPHIILAD EPTGALDSKT 
GAQVLNLFKK INESGTTIVI VTHDPGIGAS ADRCIKLFDG NIQSDEHQVP VT