Gene TDE0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0535 
Symbol 
ID2741754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp577463 
End bp578161 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content44% 
IMG OID637159407 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_971149 
Protein GI42526051 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGAAA CTATTATCCG TATGGAAAAC GTTACAAAAT TATATGAAAT GGGGGAAAGC 
ATCGTGCATG CCCTGCGAGG CATAAGTTTC AGTATAGATC AGGGAGAATT TGTTTCGATA
ATGGGGCCGT CAGGTTCGGG AAAGTCTACC TGTATGAATA TGATAGGCTG TCTTGACCGG
CCGACAAGCG GTATATTGGA AATCGGCGGA AAAGAAACGG CAAAGATGAC GGAAAAAGAA
CTTGCTGTGC TGCGTAATAA AACGATCGGC TTTGTGTTTC AGCAGTATCA TTTGCTTCCA
AATATGACGG TTTTAGAAAA CGTTATGCTT CCGTTACGCT ATCAGGGTGT GGAAAGAACA
AAACGCATTG CACTTGCAAA AGAAGCTTTG GAGCATGTCG ATATGGGCGA TAGACTTTCC
CACGGTCCTA ACGAACTTTC CGGCGGTCAA AAGCAGCGTG TCGCCATTGC ACGTGCAATG
GTAACAAAAC CGCACATTAT CTTGGCCGAT GAGCCGACCG GTGCTTTGGA CAGCAAAACA
GGAGCTCAGG TTCTTAACCT CTTTAAAAAA ATAAATGAAA GCGGAACGAC AATTGTTATT
GTTACTCACG ACCCTGGAAT CGGAGCAAGT GCGGATCGAT GTATAAAACT TTTTGACGGA
AATATTCAGT CGGATGAACA TCAGGTTCCT GTTACTTAA
 
Protein sequence
MGETIIRMEN VTKLYEMGES IVHALRGISF SIDQGEFVSI MGPSGSGKST CMNMIGCLDR 
PTSGILEIGG KETAKMTEKE LAVLRNKTIG FVFQQYHLLP NMTVLENVML PLRYQGVERT
KRIALAKEAL EHVDMGDRLS HGPNELSGGQ KQRVAIARAM VTKPHIILAD EPTGALDSKT
GAQVLNLFKK INESGTTIVI VTHDPGIGAS ADRCIKLFDG NIQSDEHQVP VT