Gene TDE0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0503 
Symbol 
ID2738988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp556670 
End bp557521 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content37% 
IMG OID637159375 
Producthypothetical protein 
Protein accessionNP_971117 
Protein GI42526019 
COG category[S] Function unknown 
COG ID[COG4296] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAA TTGAATACAT GCGGCTAAGA AATAAAATGA CACAAAAAGA ATGGGAAGAC 
TCTTTTGAGA AAAAGGAACG AGAGATTATT GTTCTAAGGC ACGAAGGCGG CGGCGGAAGT
TTGAGAAACG GTTTTTGGGA CTGGGCCGCT TATTTTTTAG CTTATGTGGA CTGTGAAACA
GGTGAACTGC ATAAAGAAGA AGGGCGTATA GTATTTCCTG TCACAGACAA AGAAAATTTG
CCATATCAAT TTGAAGACGA AACCATTTAC AAATTAAAGG TGCGTGCAAA GCTTCCTGAG
GAAGTTCCAA ACGGTGTACT ACCGACAAAA AAACATTTTT TAGTTGTGGA AGTTCTTGAA
AAAAATGCGG CTTGTAAGGA ATTGGAAGAA ATACTTGCAG AGTATAGAAA ACCTATAATT
TTACAAGATG ATATATTAGG TGAACTGATT TATGATAAAC AAATTAAAAG TTTTCAAGGA
AGTATTATTT GGCAGGATAG AAAAATAAAT ATTATATTAG ATGTAGATAA GGATAATAAA
TCAGGAATAA CAAAGGCGAA AAAAGCCCTG AAAACAATGG TTTCAGAACA GGAAAAATGG
GATGCAGAAC TGCGTAGTTT TGCTGCCAAG AAACTTACTA AGCTTGCCTG CGAATGGGCA
GAATCTGATG AAGAAGCTGC TGAAATTACA GAAGAAAGTT TTGCAAAAAG AATTAGCCTC
AGTTCAATTT GTATGACATC AGGCGATTCA TTTTCTGCCT ATTTTGATGA TGACGACCTT
TTCTTCGGGC ATTGTATAAC AGTATGCGGA AGCTTAAAGA AGGGGATTGT GTCGGCTGAT
ATAGAAGGGT GA
 
Protein sequence
MELIEYMRLR NKMTQKEWED SFEKKEREII VLRHEGGGGS LRNGFWDWAA YFLAYVDCET 
GELHKEEGRI VFPVTDKENL PYQFEDETIY KLKVRAKLPE EVPNGVLPTK KHFLVVEVLE
KNAACKELEE ILAEYRKPII LQDDILGELI YDKQIKSFQG SIIWQDRKIN IILDVDKDNK
SGITKAKKAL KTMVSEQEKW DAELRSFAAK KLTKLACEWA ESDEEAAEIT EESFAKRISL
SSICMTSGDS FSAYFDDDDL FFGHCITVCG SLKKGIVSAD IEG