Gene TDE0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0460 
Symbol 
ID2740757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp515364 
End bp516032 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content35% 
IMG OID637159332 
Producttransporter, putative 
Protein accessionNP_971074 
Protein GI42525976 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000671937 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA TTAAAGCTTT TTTTCATCAA CAAAATCTAA GACGAAGAGC GGCAAGATTG 
GCAGGACGAA TCGAAATTGT TCTATCTTTT GCAATGCTTA TTGGAATTTT AATTCTTTCA 
ATTGAAATCT TCTTTGACTT AAAAGAAATG ATTTTCGCAT TTATTTACGA CAAAAAAGTT 
CCTTCTTTCT CCGAATTCTT ATCATTGATA TTTTCTCTTG TAATCGGTCT TGAATTTGTA 
AACATGCTTA TAAAACATAC ACCGGGAAGT GCTCTTGAGG TTGTGCTTTA TACTATTGCG 
AGAAAGATTA TTGCCGATCA CGGAAGTATG CTTGATGCAC TTTTAGGTGT TGTAGCCATT 
GCAGCCTTAT TTGCCGTAAA AAAATACCTA AACGAAGGCG GAGAGTACGG AGCCGGAAAT 
GAATGTGATT ATATCGTAAA CGGCGGAACG AGTATCCATG AGATAAATCA CAGGCTGGAT 
TCGGATTTTG ATGAGGCATA CGGAAACACG GTTGCAGGTT ATTTATTTAA CTATCTTAAA 
CAACAAGGCC GCTCACCTCA CCTCGGATTG GAAGCCGACA TAGGAGAATA TAAATTCATA 
ATCCACGAAA TGGATAATGA CTTAATAAGG TATATTAAAA TTCTTCCTAT AAATGAACAT 
AAAAATTAA
 
Protein sequence
MQKIKAFFHQ QNLRRRAARL AGRIEIVLSF AMLIGILILS IEIFFDLKEM IFAFIYDKKV 
PSFSEFLSLI FSLVIGLEFV NMLIKHTPGS ALEVVLYTIA RKIIADHGSM LDALLGVVAI 
AALFAVKKYL NEGGEYGAGN ECDYIVNGGT SIHEINHRLD SDFDEAYGNT VAGYLFNYLK 
QQGRSPHLGL EADIGEYKFI IHEMDNDLIR YIKILPINEH KN