| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0456 |
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| Symbol | |
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| ID | 2740753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 512626 |
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| End bp | 513474 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637159328 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | NP_971070 |
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| Protein GI | 42525972 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000150124 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTT TAGATAAACT GAGGGGCGGC GTCATTATGG ACGTAACCAA CCCTGAACAG
GCCAAGATTG CAGAAAATGC GGGAGCCGTT GCAGTCATGG CCCTCGAAAG AATTCCGGCC
GATATAAGAG CTGCAGGCGG GGTCTCAAGA ATGAGCGATC CTAAGATGAT TAAAGAAATC
ATAAAGGCCG TAAAAATTCC CGTTATGGCA AAGGTCAGAA TCGGCCACTT TGTAGAAGCT
TCAATTTTGG AAGCCATCGG TATCGATTTT ATTGATGAGT CCGAAGTTCT GTCTCCTGCA
GACGAGGTTT ACCATGTAGA TAAAAACAAA TTTAAGGTGC CCTTTGTATG CGGCGCCCGA
AATTTGGGAG AGGCATTAAG GAGAATTCAA GAAGGCGCAA AGATGATCCG CACAAAGGGT
GAAGCCGGAA CCGGAGACGT TATTCAGGCT GTAAAACACA TGCGCCAAAT CCAAAGCGAA
ATGAGGCAGC TGACATGCCT TCGCGAAGAT GAACTCTATG TCGCAGCAAA GAATTTTCAA
GTACCTTATG CCCTTGTAGA ATATGTGCAT AAGCACGGGA AGCTCCCCGT TCCGAACTTT
TCGGCAGGAG GAGTTGCAAC CCCGGCAGAC GCAGCCTTGA TGGTTCACCT CGGTGCTGAC
GGCGTTTTTG TTGGAAGCGG TATTTTTAAA TCAGGCGATC CTGCAAAAAG AGCTGCCGCC
ATCGTAAAGG CCGTAAAGAA TTACGATAAT CCTGCAATCT TAGCAGAGGT TTCAGAAAAC
CTCGGCCCTG CCATGGTTGG AATCAACGAA GAAGAAATAA AAGTTATAAT GAGCGAAAGA
GGCGTGTAA
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| Protein sequence | MDILDKLRGG VIMDVTNPEQ AKIAENAGAV AVMALERIPA DIRAAGGVSR MSDPKMIKEI
IKAVKIPVMA KVRIGHFVEA SILEAIGIDF IDESEVLSPA DEVYHVDKNK FKVPFVCGAR
NLGEALRRIQ EGAKMIRTKG EAGTGDVIQA VKHMRQIQSE MRQLTCLRED ELYVAAKNFQ
VPYALVEYVH KHGKLPVPNF SAGGVATPAD AALMVHLGAD GVFVGSGIFK SGDPAKRAAA
IVKAVKNYDN PAILAEVSEN LGPAMVGINE EEIKVIMSER GV
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