Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0448 |
Symbol | deoC |
ID | 2740430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 505936 |
End bp | 506586 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637159320 |
Product | deoxyribose-phosphate aldolase |
Protein accession | NP_971062 |
Protein GI | 42525964 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000718751 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTAA ATAAATATAT AGATCATACC CTTCTTAAAC CGACAGCTTC CGAAAAGGAT ATAATCAAAA TTTGTAATGA AGCAAAAGAG TATCATTTTG CTTCCGTTTG TGTAAATCCT TGCAATGTTT CATTGGTGAG AAAGGAGCTG AAAGGTTCCG ATGTAAAGGT CTGCAGCGTT ATTTCTTTTC CCTTTGGGGC ATCTTCAACG GAGGTAAAAG TAGAAGAGGC TAAAAAGGCA ATTGAAGCCG GTGCTGAAGA GATAGACATG GTTATAAATG TAGGGAAACT TTTAGAAGGA GATTTGGAAT ATACTCAAAA TGAAGTGAGT GCCATAACAA AGGCCTGCCA TGAAAAGAAT GTTCTTCTTA AAGTAATTGT CGAAACCTGT TATCTTGAAG AAAAAAATAT TGCGGATATT TGTGCAATTA TCGAAAAGGC CGGGGCGGAT TTTATAAAGA CCTCGACAGG CTACGGCTCC CGCGGGGCTT CGGTTGAAGA TATAAAACTA TTTAAAAAAT ACTTAAAAAA AGATACGAAG ATAAAAGCTT CCGGCGGGGT GCGCACCCGT GAAGATGCGG AAACCTATAT CGGTTTGGGC TGTTCAAGGA TAGGAGCTAG CAGCGGTATA GCAATAGTTA CCGGCAAGTA A
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Protein sequence | MELNKYIDHT LLKPTASEKD IIKICNEAKE YHFASVCVNP CNVSLVRKEL KGSDVKVCSV ISFPFGASST EVKVEEAKKA IEAGAEEIDM VINVGKLLEG DLEYTQNEVS AITKACHEKN VLLKVIVETC YLEEKNIADI CAIIEKAGAD FIKTSTGYGS RGASVEDIKL FKKYLKKDTK IKASGGVRTR EDAETYIGLG CSRIGASSGI AIVTGK
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