| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0447 |
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| Symbol | |
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| ID | 2740429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 502898 |
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| End bp | 505876 |
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| Gene Length | 2979 bp |
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| Protein Length | 992 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637159319 |
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| Product | TPR domain-containing protein |
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| Protein accession | NP_971061 |
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| Protein GI | 42525963 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000620141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAGTA ATTTGAACAT TATAATTGAG CAGGCTAATG CAGCTATTTT ATCTCGTGAC
TATGCTTTTG CAGAAAAAAT TTTATTAAAT CAATTAAAAA AACAAAAAAA TACACCTGAT
GAGTATTATC AATTAAAAAA TCTTTTGGGA AAACTCTATA TCCGATCGGG CGATATGAAA
AAGGGCTTGG AAATATACAA AGAACTAAAT TCTCTTAATC CCAATAATTC AGATATTCTA
AACAATATGG GCGTTATCTA CCGCCGTCTT AACATGTTTA ATGAGTCGAT AGTTATCTTG
GAAAAGGCAA AGGCTATAGA CAGCAAAAAT GAAACAACTC TTTATAATCT AGGCAATACA
TATAAACAAA ACGGCGATTA CAAACATGCA ATACAATGTT TTACCGATGT ATTGGATATA
AAACCGGATG ATGCCCTTGC ATATAACCAT TTAGGAAGCG TATATTTTTT ATGCAAAGAT
TACCCTAAAG CTCTTGAAAC TTATAAGATC GGTTTAAAAG TAGATCCCAA TCATCCTTTT
TTGAATTTTA ATCTTGCAGA GTTGTATAAA GAAGAAAAGC ATTATAAAGA AGCGATTAAT
TCATATCAAA CTGCCATGAA AACAAAACCT AATTGGTATG AGGCTCTTGC GGCTATTGCC
GATTGTTATG TAGAAATGGA AGAACTCGGA AAGGCGATTG AAACCTATAA AATGATTATA
GGGTCAACAG GTCAATCGGA AGAAAATTTT ACAAAATTAG CTAAGCTTTA TGAAAAAATT
CATGAAGATA AAGATGCCGA AGATTTTTAT AAAAAAGCCG TTTCTATAAA TGGAAACTTT
TTGCCTGCAG TACTCGGATA TGCCAATATG CTTAAAGCAC AAAAAAGATA TTTTGATGCT
TATAATATTT TGATAAATAA TAAAGAGAAA TATCCTAATA ATAAAGAACT ACTATTGAGC
ACGGCAGAAG TTTGCTTGAT GCTTGAAGAT TATGCAAAGG CTAAAGAAAT CTTAAATCAT
TTAAGTAAAG AAATTAAGGG CGATAAAGAT GTTCTTAAAA TGCAGGGTAA GCTTTATTCG
GTATTAGGGG ATACAAAAAA AGCAGAGCTT ATTTTTGAAC ACTTACTTCA GTTGTCTCCG
AGCGAAATAA ATATGAGGGC CGAATTGGCT GATTTATATT TTCATAACGA TAAATATAAA
GAAGCCGCAA ATGAACTTAT CAAATATCTA AATGAAAAGC CTCAAGAAAT TTCTGCAAGG
TTAAAACTAG GAAAAGCTTA TGAACAAATG AAAAGGTATG ATTTAGCCAA GCATGAATAT
AATAAAATAA TAAAAAATGA TGCAAATAAT ACCGAAGCTC TTGCGGCAAT TTTGGAGCTG
AACAAAAATG AAGGCAATAC TGTTGAAGCT GTTCGTCTTG CAAATAAAAT TGTTGATATT
CAAACCGATA AAATAGAAAA TGACGATATA GGCAGTTTGT CCAAGTCCGT TCAGTTATAT
GAAGATGCCG TTAAGTCTTA CGGCGATGAC GGTATTCTGA ATAAAAATCT TGATAAGCTG
CGCCCTCCTC AAGAAGAACT TGATATAAGC CCTGAACCGG ATTTAGAAGA TTTGGGGGCG
GTAAATTTTG AAGATGATGA TGAAATAACT CTTAGCGAAA GCTTTGAAGA TATGCCTGAT
TTAGAGATGC CTTTTGATGA TTTAATGGAA TTGGCTGATG ATGAAGTTTT TGATCGAGGA
GAAGATGAAG ATTCTTTAGA TAATTTGGTC TATGTTGATG CACCCATTGA CGATAGTCCG
GACATAGGGG CCGAGTATGA TCCTCTTGAG CTGGGCAAGC CGGGGCCCAA TAGGAATCGA
AAGAACGATA TACCTGAAGA AGAGTTACAA CTTCAAGATA CTTCATCAAA AGGAGATGTT
CCTGCAAAAG AAACAACACC TACAAAGGAC TTTGCTCCTT CCCAATCTAA GCCATATCAA
TCTCCTTCAA GTGAATCGGC TCCTCTTCAA TCTCCGCCGT ATCAAGTACC TCCAAATGAA
CCGGCTTCTT ATCAAGCTCA GCCGCAGCAG CAATCAAGTA TACCGGAATC GGATTATCCC
CAAGATCTTA GCTCTGCCGC AAAATCCGGA AAGCCCGACA CAGCCGATAT GCCCTTTTCT
GCAGCAAAGC CTGACACAGC TGACAGCTTT GGTTCGGAAG ATGAAGGAAT CGAAATGGAA
CCGGAATTGG AAGCAGTACC GGAATCAAGG GACGCTTCTA GCCCTCTGTC TGAAAAACCG
GCAGATAAAA AAACGTCTCA AGCTTCGGGT AGTCCAAACC TTGATGAGAT GGATCTAAGT
GCTGAAGATT CTTTAAGTAA TGAAGATGAA TTAAATAATG AAAATGAGTT AATTGATGAT
CTGCCTGCCA GCTCGAATGT GCCTTTGTCC GAAGAAACAA ATTTAAGCTC TGATGATGAG
GATTTTTTAG ATCCTGCGGG TACGGCTCCC GACTCCCTTA TTCCTTCTTC CTTTGATGAT
GATTTGGATA CTTCCGATTC TGTTGATGAA ATTGTAAATA AACTTTCCGA TAAACCGTAT
CTTTCACTTC TGCCTCACAG CTTAAAAGAA TCTCCTCGAT TTGAAGAAGA GTTGGATATT
ATCGAGGGTT ATGAAATAGT TAATCTCTTT GTCTATTTGC GTGACTTGAT GGATAATCTT
CCTTCTATCG AATTAAAAGA TTTTCTTATA AGTAATGAGC GTATTCAAAT GGAATATGTT
ATAAATAAAT TGTCCGGAGA GGTCGGGTTA AAACGCAGGA TGATTCTCTT AAATGTAAAA
GGTGCTTTGA AAAAAACAAT AGACCCTAAA ACTTCTACGG ATAAAACTTT AAAGGATGTT
TTGGGCTATC TTAGAATAAT TGCATCTCAG TTGCCTGATA AGGGATTTGC TTCTGCCTGT
ATAGGAAAGA TCAATAGCCT GATAGAACAA ATCGAATAA
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| Protein sequence | MSSNLNIIIE QANAAILSRD YAFAEKILLN QLKKQKNTPD EYYQLKNLLG KLYIRSGDMK
KGLEIYKELN SLNPNNSDIL NNMGVIYRRL NMFNESIVIL EKAKAIDSKN ETTLYNLGNT
YKQNGDYKHA IQCFTDVLDI KPDDALAYNH LGSVYFLCKD YPKALETYKI GLKVDPNHPF
LNFNLAELYK EEKHYKEAIN SYQTAMKTKP NWYEALAAIA DCYVEMEELG KAIETYKMII
GSTGQSEENF TKLAKLYEKI HEDKDAEDFY KKAVSINGNF LPAVLGYANM LKAQKRYFDA
YNILINNKEK YPNNKELLLS TAEVCLMLED YAKAKEILNH LSKEIKGDKD VLKMQGKLYS
VLGDTKKAEL IFEHLLQLSP SEINMRAELA DLYFHNDKYK EAANELIKYL NEKPQEISAR
LKLGKAYEQM KRYDLAKHEY NKIIKNDANN TEALAAILEL NKNEGNTVEA VRLANKIVDI
QTDKIENDDI GSLSKSVQLY EDAVKSYGDD GILNKNLDKL RPPQEELDIS PEPDLEDLGA
VNFEDDDEIT LSESFEDMPD LEMPFDDLME LADDEVFDRG EDEDSLDNLV YVDAPIDDSP
DIGAEYDPLE LGKPGPNRNR KNDIPEEELQ LQDTSSKGDV PAKETTPTKD FAPSQSKPYQ
SPSSESAPLQ SPPYQVPPNE PASYQAQPQQ QSSIPESDYP QDLSSAAKSG KPDTADMPFS
AAKPDTADSF GSEDEGIEME PELEAVPESR DASSPLSEKP ADKKTSQASG SPNLDEMDLS
AEDSLSNEDE LNNENELIDD LPASSNVPLS EETNLSSDDE DFLDPAGTAP DSLIPSSFDD
DLDTSDSVDE IVNKLSDKPY LSLLPHSLKE SPRFEEELDI IEGYEIVNLF VYLRDLMDNL
PSIELKDFLI SNERIQMEYV INKLSGEVGL KRRMILLNVK GALKKTIDPK TSTDKTLKDV
LGYLRIIASQ LPDKGFASAC IGKINSLIEQ IE
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